Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2146 ATGGAACATGAAAAGACTGATTGTCAAGCTCCCCCAGAAGGTCCTATGTTGTGCATCAACAACTGTGGATTTTTCGGAAGTGCAGCTACCATGAACATGTGTTCTAAGTGCCACAAAGACATGATGCTGAAACAAGAGCAGGCCCAGCTTGCAGCATCATCCCTTGGCAATATTATGAATGGGTCTACAAGCAAAACTGAAAAAGAACCTGTTGTTGCTGCCAGCGTGGATTTCCAAGCCATATTTGCGGAACCTATAAACACTATCTTTAAGCCATTTGCATTTGGCTTGACTTCGGAGGAGAGTGGTGATGCAAAGCCAAAGGATGGTCCGAAACGTTGCAGCAACTGCAATAAGCGAGTTGGTTTGACAGGGTTCAACTGCCGATGTGGTAATGTTTTCTGTGCTGTACATCGGTACTCGGACAAGCATGATTGCCCGTTTGATTACCGCACTGCTGCACAAGATGCCATAGCTAAAGCAAACCCAGTTGTCAAGGCTGAGAAGCTTGATAAGATCTAA 522 0.454 MEHEKTDCQAPPEGPMLCINNCGFFGSAATMNMCSKCHKDMMLKQEQAQLAASSLGNIMNGSTSKTEKEPVVAASVDFQAIFAEPINTIFKPFAFGLTSEESGDAKPKDGPKRCSNCNKRVGLTGFNCRCGNVFCAVHRYSDKHDCPFDYRTAAQDAIAKANPVVKAEKLDKI* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2146 173 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 173 - -
Tpr3g2146 173 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Tpr3g2146 173 Gene3D - 1 68 - -
Tpr3g2146 173 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Tpr3g2146 173 PANTHER ZINC FINGER AN1 DOMAIN STRESS-ASSOCIATED PROTEIN 1 173 - -
Tpr3g2146 173 ProSiteProfiles Zinc finger AN1-type profile. 108 154 IPR000058 GO:0008270
Tpr3g2146 173 Gene3D - 96 169 IPR035896 -
Tpr3g2146 173 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 53 - -
Tpr3g2146 173 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Tpr3g2146 173 SUPERFAMILY AN1-like Zinc finger 99 168 IPR035896 -
Tpr3g2146 173 SMART AN1_Zf_4 114 151 IPR000058 GO:0008270
Tpr3g2146 173 Pfam AN1-like Zinc finger 114 150 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2146 Tpr-Chr3 19770783 19774093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2146 4 173 C2H2 Transcription Factor Family AT3G52800 41.176 8.98e-38 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2146 - - gmx:100499857 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2146 3 19770783 19774093 Tpr3g2146 3 19770783 19774093 ECH
Tpr6g1548 6 16771447 16773799 Tpr3g2146 3 19770783 19774093 ECH