Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2134 ATGGGAAGTTTGGAATTCCAAAGAGATATCAAAATCATGGGAAGTGTGGAGAAAGACCTAAAGAATATGAGGGAGTATTTTAGGAGTGGAATAACAAAAGAAGCTTCATGGAGAGAATCACAACTAAAAGGATTGCGTCGTTTCTTAATGGAAAAAGAGAATGATATCTTCATGGCACTCATGCAAGATTTAGGGAAACATCGTATTGAAGCTTTTAGAGATGAGATAGGAACTTTAGTGAAGACCTTAAATCTCGCAATAAAGTCTCTGAAAGATTGGATGTCAAGCAAGAAGGCTCCACTACCAGCAATAGCATTGCTTTCAAGTGCAGAAATTATTCATGAACCTCTTGGTCTTGTCCTCATTATTTCATCTTGGAATTTCCCATTTGGAGTGTCCTTGGAGCCACTAATAGGAGCAATAACTGCTGGAAACGCAGCAGTATTAAAACCTTCAGAGTTGTCTCCTGTATGTTCCTCTTTACTTGCTTCTGGCATTGCAACTTACCTGGACAATAAAGCCATTAAGGTTATAGAAGGGGGGCCAGAGGAATCAGAGCAATTGTTACAACAAAGATGGGACAAAATCTTTTTTACAGGTAGTGGACGAGTGGGGCGCATTGTGATGTCTGCAGCTGCCAAACACTTGACCCCTGTAACACTGGAGTTGGGTGGAAAATGTCCTGCTGTTGTGGACTCCCTTACATCTTCTTGGGATTTAGAGGTGACTGTGAAGCGGATTATTGTGGGAAAATATGGAACTTGTGCTGGTCAAGCATGCATAGCAATTGACTATGTCCTTGTGGAAAAGAGTTACTATCCAAAACTGGTTGAATTGATGAAGGTGTGGATCAAGAAAATGTTTGGAGACAACCCAAAACATTCCAACACTATAGCAAGGATAGTTAATAAACACCATTTAAGTAGATTGAAGCAACTTCTTAATGATAAAAAGGTTCAAGAATCTGTGGTTTATGGTGGCTCAGTGGATGAAGAAAACTTATTTATTGAGCCAACAATCTTGGTGGATCCACCACTTGATTCAACAATAATGATAGATGAAGTTTTTGGTCCATTACTTCCAATTATTACTGTTGATAAGATTGAGGACAGTATTGAATTCATAAGCTCTAGGCCTAAACCTCTAGCCCTTTATGTTTTCTCCAAAAACAAAACATTGCAGAACAGAATGATATCTGAAACATCATCTGGAAGTGTTACATTCAATGATGCAATTCTACAATATGCAGCAGATTCTCTACCATTTGGAGGAGTAGGTGCAAGTGGATTTGGCATGTACCATGGAAAATTCTCCTTTGACACATTCAGTCACCAGAAGGCTATTGTTAGAAGAAGTTTCTTAACTGATTTTTGGTATAGATATCCACCATGGACAGCAAATAAGTTTCAACTACTTGAGGTCTCTTACAATTATGATTATCTGGGATTGGTCCTTGTTATTCTTGGATTAAAGAGACCTTCAAAACGCCAGATCATACGTTGTTAG 1506 0.3865 MGSLEFQRDIKIMGSVEKDLKNMREYFRSGITKEASWRESQLKGLRRFLMEKENDIFMALMQDLGKHRIEAFRDEIGTLVKTLNLAIKSLKDWMSSKKAPLPAIALLSSAEIIHEPLGLVLIISSWNFPFGVSLEPLIGAITAGNAAVLKPSELSPVCSSLLASGIATYLDNKAIKVIEGGPEESEQLLQQRWDKIFFTGSGRVGRIVMSAAAKHLTPVTLELGGKCPAVVDSLTSSWDLEVTVKRIIVGKYGTCAGQACIAIDYVLVEKSYYPKLVELMKVWIKKMFGDNPKHSNTIARIVNKHHLSRLKQLLNDKKVQESVVYGGSVDEENLFIEPTILVDPPLDSTIMIDEVFGPLLPIITVDKIEDSIEFISSRPKPLALYVFSKNKTLQNRMISETSSGSVTFNDAILQYAADSLPFGGVGASGFGMYHGKFSFDTFSHQKAIVRRSFLTDFWYRYPPWTANKFQLLEVSYNYDYLGLVLVILGLKRPSKRQIIRC* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2134 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 225 428 IPR016163 GO:0016620
Tpr3g2134 501 SUPERFAMILY ALDH-like 16 465 IPR016161 GO:0016491
Tpr3g2134 501 PIRSF ALDH 5 484 IPR012394 GO:0006081
Tpr3g2134 501 PANTHER ALDEHYDE DEHYDROGENASE 14 498 - -
Tpr3g2134 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 446 IPR016162 GO:0016491
Tpr3g2134 501 Pfam Aldehyde dehydrogenase family 17 448 IPR015590 GO:0016491
Tpr3g2134 501 PANTHER ALDEHYDE DEHYDROGENASE 14 498 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2134 Tpr-Chr3 19663438 19669233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2134 15 492 Aldehyde Dehydrogenase Gene Family AT4G36250 55.439 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2134 K00128 - gmx:100817701 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2134 3 19663438 19669233 Tpr3g2134 3 19663438 19669233 ECH
Tpr7g4530 7 53851916 53857836 Tpr3g2134 3 19663438 19669233 PCT