Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2125 ATGGCTTCCATTCCTCTCACCACCACCGCCACTCTCCTCCCATCTCTCCGCCACCGTTCTTCCCCACAACTCCGCCACTTCCATTCCAACACCACTCTCATTCTCAAACCTCTCAAATCAATCCGCCACTCTTCCATTTCCACCTTCTCCCCTCTCCCACACTCAAACCTCATTTCTTCAAATTCAAAACGCAACACTCTCGTTGTTAAAGCTTCATCAGCTTCCATCACACCAGCTCCGGCTCCAGCTCCAGCACCGGCTCAGCCATGGCAAGGCGCCGCGATAAAACCACTCTTAGCATCAATAGCAACCGGAGTTATACTCTGGTTTGTTCCCACTCCGGCAGGTGTATCAAAAAAAGCGTGGCAGTTACTCGCGATTTTCTTAGGAACGATCGTTGGAATCATCACACAACCATTACCACTCGGTGCCGTCGCGATTTTAGGTTTAGGAGTTTCTGTTCTAACCAAAACCCTAACCTTTGTTGCTGCATTCTCTGGTTTCGGTGATCCAATTCCATGGTTAATTTGTCTCGCATTTTTCTTTGCTAAGGGTTTTATCAAAACTGGATTAGGTAACCGTGTTGCGTATCAATTTGTTTCGCTTTTCGGTAGTTCATCGTTAGGGTTAGGTTATAGTTTGGTTTTCAGTGAAGCTTTATTAGCACCGGCGATTCCATCGGTTTCGGCTAGAGCTGGTGGAATTTTTCTTCCATTGGTTAAGTCATTGTGTGTTGCTTGTGGAAGTAATGTTGGTGATGGAACTGAGGATAAGCTTGGGTCTTGGTTGATGCTTACTTGTTTTCAGACGTCTTGTATTTCGTCGGCTATGTTTTTGACTGCAATGGCTGCGAATCCGCTTTGTGCTACGCTTACTTTGAATTCAATTAACCAGACAATTGGTTGGTTGGATTGGGCTAAAGCTGCTATTGTGCCTGGTTTGGTGTCGTTGATATTGGTGCCGTTGATTTTGTATGTTATATACCCTCCTACCTTGAAATCTAGTCCTGATGCACCTAAGCTTGCTAGGGAAAAGTTGGAGAAAATGGGGCCTATGACAGGCAATGAGAAAATTATGACTGCTACTCTGTTTCTTACGGTGGGACTTTGGGTTTTTGGAGGGATTCTTAAAGTAGATGCTGTAACTTCTGCCATTCTTGGATTAGCGGTACTCCTCATCACAGGGGTTGTAACATGGAAAGAGTGCTTAGCTGAAGGTGTTGCATGGGATACACTCACATGGTTTGCTGCCCTCATTGCAATGGCTGGGTATTTGAACAAATATGGTCTCATTGCTTGGTTCAGTCAAACAGTAGTCAAGATTGTTGGTGGATTGGGTCTCTCATGGCAACTATCTTTTGGTATTCTGGTCCTCCTCTACTTCTACTCTCATTACTTCTTTGCAAGTGGAGCTGCTCATATTGGTGCCATGTTTACTGCATTTTTGTCTGTTGCTACTGCTCTGGGGACTCCACCATTCTTCGGAGCCATGGTGCTGTCCTTCCTCTCCAACCTTATGGGAGGCCTTACTCATTATGGGATTGGGTCAGCTCCAGTGTTTTTTGGTGCCAACTATGTCCCACTTGCCAAATGGTGGGGTTATGGCTTTGTTATTAGTATTGTGAACATTATAATCTGGCTTGGACTCGGGTCTATTTGGTGGAAAGCCATTGGCTTGTGGTAA 1683 0.4534 MASIPLTTTATLLPSLRHRSSPQLRHFHSNTTLILKPLKSIRHSSISTFSPLPHSNLISSNSKRNTLVVKASSASITPAPAPAPAPAQPWQGAAIKPLLASIATGVILWFVPTPAGVSKKAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLTFVAAFSGFGDPIPWLICLAFFFAKGFIKTGLGNRVAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTEDKLGSWLMLTCFQTSCISSAMFLTAMAANPLCATLTLNSINQTIGWLDWAKAAIVPGLVSLILVPLILYVIYPPTLKSSPDAPKLAREKLEKMGPMTGNEKIMTATLFLTVGLWVFGGILKVDAVTSAILGLAVLLITGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLIAWFSQTVVKIVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPFFGAMVLSFLSNLMGGLTHYGIGSAPVFFGANYVPLAKWWGYGFVISIVNIIIWLGLGSIWWKAIGLW* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2125 560 CDD ArsB_NhaD_permease 132 554 - -
Tpr3g2125 560 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 16 560 - -
Tpr3g2125 560 Pfam Sodium:sulfate symporter transmembrane region 97 560 IPR001898 GO:0016020|GO:0022857|GO:0055085
Tpr3g2125 560 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 112 554 IPR001898 GO:0016020|GO:0022857|GO:0055085
Tpr3g2125 560 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 16 560 IPR030676 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2125 Tpr-Chr3 19556550 19559925 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2125 1 559 Antiporters AT5G12860 78.470 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2125 - - gmx:100796365 882.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2125 3 19556550 19559925 Tpr3g2125 3 19556550 19559925 ECH