Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2118 ATGGATGATGGTCACATGCACCACGGCGGCATGGATGGTATGAACATGTCATCACCGCCATCATCATCAACCAATGGTACTACCATGATGATGGGTCATAGTATGATACACATGACATTCTTTTGGGGTAAAGATGCTTTGATTCTCTTCAATAATTGGCCTAATGGTGATACTGGTATGTATGTATTGGCTTTGATTATTGTTTTCATCATGTCTCTACTCATCGAGTTACTCTCAAGGACCCGGTTCATTAAACCCGGTTCAAACACAGTTGCTTCCGGTTTGGTTCAGACACTTTTGCATGTTGTTAGAGTTGGGTTAGCTTATTTGGTTATGTTGGCACTTATGTCTTTTAATGGTGGTGTTTTCTTGGTTGCTGTTCTTGGTCATGCTCTTGGATTTTTCTTATGTAGCAGTGCTTTCAGAAAACCACATCATGATGAACCTTATGATCTTCCTCCCATATCTTGTTAA 474 0.403 MDDGHMHHGGMDGMNMSSPPSSSTNGTTMMMGHSMIHMTFFWGKDALILFNNWPNGDTGMYVLALIIVFIMSLLIELLSRTRFIKPGSNTVASGLVQTLLHVVRVGLAYLVMLALMSFNGGVFLVAVLGHALGFFLCSSAFRKPHHDEPYDLPPISC* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2118 157 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 13 155 IPR007274 GO:0005375|GO:0016021|GO:0035434
Tpr3g2118 157 Pfam Ctr copper transporter family 38 80 IPR007274 GO:0005375|GO:0016021|GO:0035434
Tpr3g2118 157 Pfam Ctr copper transporter family 95 137 IPR007274 GO:0005375|GO:0016021|GO:0035434
Tpr3g2118 157 MobiDBLite consensus disorder prediction 1 23 - -
Tpr3g2118 157 PANTHER COPPER TRANSPORTER 1 13 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2118 Tpr-Chr3 19501263 19502019 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2118 39 157 Inorganic Solute Cotransporters AT5G59030 48.387 2.12e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2118 K14686 - gmx:100306175 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2118 3 19501263 19502019 Tpr3g2118 3 19501263 19502019 ECH