Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2117 ATGGATGATGGACACATGCACCACGGTGGCATGGATGGTATGACCATGACACCACCAACACCACCACCATCATCATCATCATCATCATCCAATGGTGGTATGGGACATGAGATGCACGCTATGATGCATATGACATTCTTCTGGGGTAAAGATGTTTTGATTCTCTTCGATAATTGGCCTAATGGTGATATTGGTAAGTATGTATTGGCTTTGATAATTGTTTTCGTCATGTCCGTACTCATCGAGTTACTCTCACGGATCCGATTCATTAAACCCGCTTCAAACGCTGTTGCTTCCGGTTTGGTTCAGACAGTTTTGCATGTTGTTAGAGTTGGGTTAGCATATTTGGTTATGTTGGCACTTATGTCTTTTAATGGTGGTGTGTTTTTGGTTGCTGTTCTTGGTCATGCTATTGGATTCTTCTTATGTAGCAGTGCTTTCAAAAAACAACCGCATCATGATGAACCTTATGATCTTCCTCCTATATCTTGTTAA 495 0.4121 MDDGHMHHGGMDGMTMTPPTPPPSSSSSSSNGGMGHEMHAMMHMTFFWGKDVLILFDNWPNGDIGKYVLALIIVFVMSVLIELLSRIRFIKPASNAVASGLVQTVLHVVRVGLAYLVMLALMSFNGGVFLVAVLGHAIGFFLCSSAFKKQPHHDEPYDLPPISC* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2117 164 MobiDBLite consensus disorder prediction 1 32 - -
Tpr3g2117 164 Pfam Ctr copper transporter family 44 88 IPR007274 GO:0005375|GO:0016021|GO:0035434
Tpr3g2117 164 Pfam Ctr copper transporter family 98 143 IPR007274 GO:0005375|GO:0016021|GO:0035434
Tpr3g2117 164 PANTHER COPPER TRANSPORTER 1 24 162 - -
Tpr3g2117 164 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 24 162 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2117 Tpr-Chr3 19488033 19489021 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2117 45 164 Inorganic Solute Cotransporters AT5G59030 46.774 5.49e-33 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2117 K14686 - gmx:100306175 189.504