Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr3g2105 | ATGGAATCTGATCAATGTGATCAAGGTGGTGGTAGTGGTGGTGATGATAAAGATGGTTTAAAACAAGTGACCAACCTTAGGTCCTATGAGTGCAATTTTTGCAAGAGAGGTTTCTCTAATGCACAAGCACTTGGAGGACACATGAATATTCATAGAAAAGACAAAGCAAAGCTCAAACAACAATCTTCAAATTTGGAGCAAGGAAATTCTAGTGATCAAGACCTCAACAAATTATTACCAAATTTTTTGAGTTCTTCTAATATTGTGTTGCCTCAAAAACAAGATCAACAACATGTTCCTTCTAGAAGTGAAGAAATTATTGTAATTGATCATACAAGACAACAACTTCCACTTTTTTCAGAATCACCAACAAAAATTGAAATGCAAATTCAACAAGGTGGTCAAATTCATCAAAGGGAAATTACTACTACTACTGCTACTACTGTGACTGCGACGACGACCACGATTACACAAGAGGCTTTATTATTATCTAATGATCAAGATTCTTCATTGGAATTAGACCTTGAATTAAGACTAGGGTCTGAGCCTCATGATTCATCAAAGCCAACGGGTACAAGAAAATTCTTTTGA | 591 | 0.3553 | MESDQCDQGGGSGGDDKDGLKQVTNLRSYECNFCKRGFSNAQALGGHMNIHRKDKAKLKQQSSNLEQGNSSDQDLNKLLPNFLSSSNIVLPQKQDQQHVPSRSEEIIVIDHTRQQLPLFSESPTKIEMQIQQGGQIHQREITTTTATTVTATTTTITQEALLLSNDQDSSLELDLELRLGSEPHDSSKPTGTRKFF* | 197 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr3g2105 | 196 | Pfam | C2H2-type zinc finger | 29 | 53 | - | - | |
Tpr3g2105 | 196 | SUPERFAMILY | beta-beta-alpha zinc fingers | 26 | 56 | IPR036236 | - | |
Tpr3g2105 | 196 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 31 | 51 | IPR013087 | - | |
Tpr3g2105 | 196 | Gene3D | Classic Zinc Finger | 18 | 85 | - | - | |
Tpr3g2105 | 196 | PANTHER | OS07G0101800 PROTEIN | 3 | 188 | - | - | |
Tpr3g2105 | 196 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 3 | 188 | - | - | |
Tpr3g2105 | 196 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 29 | 56 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr3g2105 | Tpr-Chr3 | 19408851 | 19409852 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr3g2105 | 27 | 72 | C2H2 Transcription Factor Family | AT3G53820 | 69.565 | 8.87e-17 | 72.0 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Tpr3g2105 | zf-C2H2_6 | 1.7e-05 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr3g2105 | - | - | gmx:102667172 | 127.872 |