Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2105 ATGGAATCTGATCAATGTGATCAAGGTGGTGGTAGTGGTGGTGATGATAAAGATGGTTTAAAACAAGTGACCAACCTTAGGTCCTATGAGTGCAATTTTTGCAAGAGAGGTTTCTCTAATGCACAAGCACTTGGAGGACACATGAATATTCATAGAAAAGACAAAGCAAAGCTCAAACAACAATCTTCAAATTTGGAGCAAGGAAATTCTAGTGATCAAGACCTCAACAAATTATTACCAAATTTTTTGAGTTCTTCTAATATTGTGTTGCCTCAAAAACAAGATCAACAACATGTTCCTTCTAGAAGTGAAGAAATTATTGTAATTGATCATACAAGACAACAACTTCCACTTTTTTCAGAATCACCAACAAAAATTGAAATGCAAATTCAACAAGGTGGTCAAATTCATCAAAGGGAAATTACTACTACTACTGCTACTACTGTGACTGCGACGACGACCACGATTACACAAGAGGCTTTATTATTATCTAATGATCAAGATTCTTCATTGGAATTAGACCTTGAATTAAGACTAGGGTCTGAGCCTCATGATTCATCAAAGCCAACGGGTACAAGAAAATTCTTTTGA 591 0.3553 MESDQCDQGGGSGGDDKDGLKQVTNLRSYECNFCKRGFSNAQALGGHMNIHRKDKAKLKQQSSNLEQGNSSDQDLNKLLPNFLSSSNIVLPQKQDQQHVPSRSEEIIVIDHTRQQLPLFSESPTKIEMQIQQGGQIHQREITTTTATTVTATTTTITQEALLLSNDQDSSLELDLELRLGSEPHDSSKPTGTRKFF* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2105 196 Pfam C2H2-type zinc finger 29 53 - -
Tpr3g2105 196 SUPERFAMILY beta-beta-alpha zinc fingers 26 56 IPR036236 -
Tpr3g2105 196 ProSitePatterns Zinc finger C2H2 type domain signature. 31 51 IPR013087 -
Tpr3g2105 196 Gene3D Classic Zinc Finger 18 85 - -
Tpr3g2105 196 PANTHER OS07G0101800 PROTEIN 3 188 - -
Tpr3g2105 196 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 3 188 - -
Tpr3g2105 196 ProSiteProfiles Zinc finger C2H2 type domain profile. 29 56 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2105 Tpr-Chr3 19408851 19409852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2105 27 72 C2H2 Transcription Factor Family AT3G53820 69.565 8.87e-17 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr3g2105 zf-C2H2_6 1.7e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2105 - - gmx:102667172 127.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2105 3 19408851 19409852 Tpr3g2105 3 19408851 19409852 ECH