Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2098 ATGGGGGAAGAAGTTCGAACAGACGAAGAACGCGTAACGGACTGGGAAAAAGGTTTACCCAATCTTCACGATCTAACTCCACTTTCCATGGCGTTAATTCCACCGGAGTTAGCTTCCGCTTTCAGCATCTCCCCGGAGCCTCACCGTACACTCATCGACGTCAACCGCGCCTCCCGCAACACTCTCTCAATTCTCCGAAACTCCGGAGGAACAGGAACAAATCACCACAATAACTTCTCACCAGAACCAGAAGAAGAAGATGAAGAAATCGAAGATGAAACCGATCGAGATGGTTCAGGATCTGATTCACGAAAACATCGGAAACTCGATTCGGTTACGGAGGAAGCGGATTCGGCGGTTAGAACGACTGAAACGACGTTAAAACGGCCGCGTTTGGTGTGGACTCCACAGTTGCATAAAAGATTTGTTGACGTAGTTGCGCATCTTGGAATAAAAAACGCGGTTCCGAAAACGATTATGCAGTTGATGAATGTTGAAGGATTAACACGTGAGAATGTTGCTTCTCATTTGCAGAAATATCGTCTTTATTTGAAGAGGATGCAAGGTCTTTCAAATGATGCACCTTCTTCTTCTGATCATCTTTTTGCATCTACACCTGTTCCTCAGAGTTTGCAATTGCAGCAACATGAATCTGTTTCTGCTAATAATCATTCTCATTCGCATTCGAATGGACATGGAATTGGGAATGGGAATAATTCGCATTCGCATCATTCTGTAACTATTCCTATGCCATATCCGCCACCTCCGACGATGATGACAATGCCGCCGATGCTTGGTATGGGACATCATCATCCTCATCATCATCCACATGGTCCTATGGGGATGAGTTTGCCTCCTCCTTCTGGTTCTAACTCGTATCGGTCGCATCCGTTTAATATGATGCATCATAGGGACTGGCCTCCGAATCCTCACTCTCATCATCCTCATATGTCTGCTAATGATAGTAATAAATAA 975 0.4503 MGEEVRTDEERVTDWEKGLPNLHDLTPLSMALIPPELASAFSISPEPHRTLIDVNRASRNTLSILRNSGGTGTNHHNNFSPEPEEEDEEIEDETDRDGSGSDSRKHRKLDSVTEEADSAVRTTETTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNDAPSSSDHLFASTPVPQSLQLQQHESVSANNHSHSHSNGHGIGNGNNSHSHHSVTIPMPYPPPPTMMTMPPMLGMGHHHPHHHPHGPMGMSLPPPSGSNSYRSHPFNMMHHRDWPPNPHSHHPHMSANDSNK* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2098 324 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 130 182 IPR006447 GO:0003677
Tpr3g2098 324 SUPERFAMILY Homeodomain-like 126 186 IPR009057 -
Tpr3g2098 324 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 7 298 IPR044841 GO:0003700|GO:0006355
Tpr3g2098 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 134 185 IPR017930 -
Tpr3g2098 324 Gene3D - 125 188 - -
Tpr3g2098 324 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 7 298 - -
Tpr3g2098 324 MobiDBLite consensus disorder prediction 66 123 - -
Tpr3g2098 324 MobiDBLite consensus disorder prediction 97 123 - -
Tpr3g2098 324 Pfam Myb-like DNA-binding domain 133 181 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2098 Tpr-Chr3 19356699 19359609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2098 1 212 G2-like Transcription Factor Family AT3G46640 59.414 1.77e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tpr3g2098 Myb_DNA-binding 1.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2098 - - gmx:100816634 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2098 3 19356699 19359609 Tpr3g2098 3 19356699 19359609 ECH