Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2095 ATGAGTTTTTCTTTTCGAGGGAGTAGGGGAGATATTGAAAGCGGATTTTCAGAATATGTTCCTGAAAGAACCTCAACGCGGGTTCATCCATCTCGGCCATCTAATAGCAACACTCTAGCTTTTCTTATTACAGTTATTTTGTTATTCATGCTTCAAGAACAGGCCAGGGCTCATGCTGCAGCAGCCTCTGGTTTGCTTGGCCATGCTGAATTGCGTTTTAACATGCCACCGTCTATTGCGATTGCATCTAGAGGAAGATTGCAGGGTCTTAGACTTCAGCTTGCACTTCTTGACCAAGAATTTGATGAACTAGATTATGAAACTTTGAGAGCTCTGGAATTTGATACTGCTTCTAGTACTCCTTCAATGACTGACGAAGAGATAAATGCCTTGCCTATTCACAAATATAAAGTTCCAGGCCCAACAAAAGATGGCTCCACCGGTTTGACATCCTCTTCTTCAGAAGCAGCTGAGGCTAAACAAGACTCTAAAGGAGCAGAGGGAAGTGCCAAAGATCCAGAAGATGAGCTGACATGTACTATATGCTTGGACGAAGTTATGAGGGGGGAACTTGTCCGAAGCTTGCCATGCTTGCATCAGTTTCATGTCAACTGCATTGATCCATGGCTCCGACAACAAGGAACATGTCCTGTGTGCAAATTTAGCATGGGGTCAAGAAGGCAGAGAAACACCGAGGGCGAGTCAGATGATTCAGATACTGTATAG 726 0.4421 MSFSFRGSRGDIESGFSEYVPERTSTRVHPSRPSNSNTLAFLITVILLFMLQEQARAHAAAASGLLGHAELRFNMPPSIAIASRGRLQGLRLQLALLDQEFDELDYETLRALEFDTASSTPSMTDEEINALPIHKYKVPGPTKDGSTGLTSSSSEAAEAKQDSKGAEGSAKDPEDELTCTICLDEVMRGELVRSLPCLHQFHVNCIDPWLRQQGTCPVCKFSMGSRRQRNTEGESDDSDTV* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2095 241 CDD RING-H2_PA-TM-RING 178 220 - -
Tpr3g2095 241 SMART ring_2 179 219 IPR001841 -
Tpr3g2095 241 Coils Coil 87 107 - -
Tpr3g2095 241 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 52 - -
Tpr3g2095 241 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 51 240 - -
Tpr3g2095 241 PANTHER TARGET OF ERK KINASE MPK-1 51 240 - -
Tpr3g2095 241 PANTHER TARGET OF ERK KINASE MPK-1 1 52 - -
Tpr3g2095 241 MobiDBLite consensus disorder prediction 144 159 - -
Tpr3g2095 241 SUPERFAMILY RING/U-box 172 225 - -
Tpr3g2095 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 163 237 IPR013083 -
Tpr3g2095 241 ProSiteProfiles Zinc finger RING-type profile. 179 220 IPR001841 -
Tpr3g2095 241 MobiDBLite consensus disorder prediction 132 172 - -
Tpr3g2095 241 Pfam Ring finger domain 178 220 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2095 Tpr-Chr3 19321658 19326968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2095 1 241 C3H Transcription Factor Family AT3G55530 54.710 3.05e-96 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2095 K16283 - gmx:100805406 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2095 3 19321658 19326968 Tpr3g2095 3 19321658 19326968 ECH