Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2089 ATGGAAAAACATCGCGTTCTAAGAAAGGTTCAACAAGCTGTTGGTAGCTATGATCAAAGGAATGCAAATGATATACTCAAGCAGATTAGGCAGCACTCTTCATTGTGCGGTGATGGGCTCCAGCTTTTAGCTCATTACTTTGCTGATGGCCTGGAGGCGCGGTTATCTGCTGGGACACCGATGTATAAACAACTGCAGTCATCGTCTTCTGCAGATACGCTAAAAGCTTACAAAGTTTACATTACAGCATCTCCATTTCAACGGATGTCGAATTTCTTGTCAAACAGAACTATTCTCGGTCTGGCACAAAACAAAAGCAGCCTCCATATTATTGACTTTGGTGTTTTCTATGGCTTCCAGTGGCCTTGCCTCATTCAGCGCCTTTCAGAGAGACCAGATGGGCCACCGAGGCTTCGTATTACAGGAATTGATCTTCCTCATCCAGGATTTAGGCCTGCTGAAAGAGTTGAGGAGACGGGTCGGAGACTTGAGAAGTACTCCAAGAGGTTTGGAGTTCCATTTGAGTATAATTGCCTTGCACAGAAATGGGACACTATAAGACCAGAGGATATCAAGATTAATAGAGAAGAAGTAACAGTGGTTAACTGTTTATACAGAGTGAAGAACCTTTCCGATGAAACAGTGACGGCAAATTGTCCGGGAGACGCTGTGTTGAGGTTGATAAGGAGGATTAATCCAAACATCTTCATACACGGAGTGGTGAATGGAACATATAATGCACCATTTTTTCTTACTAGGTTCAGGGAAGCACTGTTTCATTTAAGAGAGAAACATCTTGGCAGTTAA 807 0.4312 MEKHRVLRKVQQAVGSYDQRNANDILKQIRQHSSLCGDGLQLLAHYFADGLEARLSAGTPMYKQLQSSSSADTLKAYKVYITASPFQRMSNFLSNRTILGLAQNKSSLHIIDFGVFYGFQWPCLIQRLSERPDGPPRLRITGIDLPHPGFRPAERVEETGRRLEKYSKRFGVPFEYNCLAQKWDTIRPEDIKINREEVTVVNCLYRVKNLSDETVTANCPGDAVLRLIRRINPNIFIHGVVNGTYNAPFFLTRFREALFHLREKHLGS* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2089 268 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 261 IPR005202 -
Tpr3g2089 268 ProSiteProfiles GRAS family profile. 1 268 IPR005202 -
Tpr3g2089 268 Pfam GRAS domain family 6 260 IPR005202 -
Tpr3g2089 268 PANTHER SCARECROW-LIKE PROTEIN 30 6 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2089 Tpr-Chr3 19252523 19253391 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2089 12 260 GRAS Transcription Factor Family AT1G07530 57.312 4.77e-99 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr3g2089 GRAS 9.8e-70 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2089 - - gmx:100815586 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4506 7 53676539 53679709 Tpr3g2089 3 19252523 19253391 PCT