Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2086 ATGTTATCTACCGATACACTTGTTGAGAATTTTCCTGGTTCTGTCAATGGATGCATGTTTGGAAACATTCCTGTCTCTGTTTTTTCAAATCAGAATCCAGAAAATGGTTTCAAATTTGAAGATTCAAATTCAATTTCAATATCCCCTTCAACTCATTCAGATTCTCCAAATGATTCTGGTACAACCTCAAATGTTGAATCTTCTGAGAGTAGTAAATATTCAAATCCTATTCTTAGATTTATAAGTGATATTCTCATGGATGAAGAAGATTATTTGGAGAAAAAACCTTGTATGTTGCAAGATTGTTTGAAACTTCAAGCTGCTGAAAAATCATTTTATGATGTTTTAGGTAATAATAATAATAATAATTTTGAAGCAGGAACAGTAACTAGTACTAGTTCTGAGAGTTATAGTAATTCTAGTTATACCACTGATAATTCTGTAGTTGATTATGATTCACCTGAAAATAATGCCTATGAGGTGTTTGATAAAATGCCTCAAGCTGTTTTCAATTTTCCAAGTGATGCTTGGAATATGAATCAAGAGGGTACTTTGATTTTGGGTTCTAGAGGAGGATCAAGGGAAAAGAGAGGTCTTTTGATGAATGATGTTGGTATTTTACATGAAGAGGATCTGAGAAGTAGCAAGGTTTCAGCTGTTTATTCTGATGATTCAGAGTTATCAGAGATGTTTGATGAGGTACTTCTTTGTAAGGATGGTAAAAGTCCATCCATTTTTGGTGCTAATTCTGAACCATCATCGCTTTCACATGTTTCTAGTTCATTAGGATCTAATGGAAAAACATCGCGTTCTAAGAAAGGTTCAAACAAGGTTAAAAAACTAAGTTCTACTGTAGATTTATGGACTTTGTTAACTCAATGTGCACAAGCTGTTGGTAGCTATGATCAAAGGAATGCAAATGATATACTCAAGCAGATTAGGCAGCACTCTTCAGCGCATGGTGATGGACTCCAGCGTTTAGCTCATTACTTTGCTGATGGCCTCGAGGCGCGGTTATCTGCCGGGACACCAATGTATAAACAACTGCAGTCATCGTCTTCTGCAGATATGCTAAAAGCTTACAAAGTTTACATCACAGCATCTCCATTTCAACGGATGTCGAATTTCTTAGCAAACAGAACTATTCTCGGTCTGGCACAAAACAAAAGCAGCCTCCATATTATTGACTTTGGTGTTTTCTATGGCTTTCAGTGGCCTTGCCTCATTCAGCGTCTTTCGGAAATGCCTCAGGGGCCACCGAGGCTTCGAATTACAGGAATTGATCTTCCTCAGCCAGGATTTAGGCCTGCAGAAAGAGTTGAGGAGACAGGTCGGCGACTTGAGAAGTACTGCAAGAGGTTTGGAGTTCCATTTGAGTACAATTGTCTTGCACAGAAATGGGACACTATCAGACTTGAGGATCTCAAGATTGATAGAGAAGAAGTAACAGTGGTTAACTGTTTATACAGATTGAAGAACCTTTCTGATGAAACGGTGACGGCGAATTGTCCGAGAGATGCTGTGTTGAGGTTGATAAGGAAGATTAATCCAAACATCTTCATACATGGAGTAGTGAATGGAACATATAATGCACCATTTTTTCTTACTAGGTTCAGAGAAGCACTGTTTCATTTCTCATCATTGTTTGATATGCTTGAAGCTACTGTGCCGCGTGAAGATCCATATAGGTTGATGTTTGAGAAAGGGTTATTTGGAAGGGATGCAGTGAATGTGATAGCTTGTGAAGGAGCAGAGAGAGTTGAAAGGCCAGAGACTTACAAGCAGTGGCAGGTTAGGAACAAGAGAGCAAGGTTCAAGCAACTTCCTTTGGCTCCAGAATTGGTGGATAGGGTGAAGGAAATGGTGAAGAAGGAATATCCGAAAGATTTTGTAGTTGATGAGGATGGGAAGTGGGTTCTGCAGGGTTGGAAAGGACGTATTCTGCATGCTGTTTCTTGTTGGGTTCCTGCTTAA 1974 0.3891 MLSTDTLVENFPGSVNGCMFGNIPVSVFSNQNPENGFKFEDSNSISISPSTHSDSPNDSGTTSNVESSESSKYSNPILRFISDILMDEEDYLEKKPCMLQDCLKLQAAEKSFYDVLGNNNNNNFEAGTVTSTSSESYSNSSYTTDNSVVDYDSPENNAYEVFDKMPQAVFNFPSDAWNMNQEGTLILGSRGGSREKRGLLMNDVGILHEEDLRSSKVSAVYSDDSELSEMFDEVLLCKDGKSPSIFGANSEPSSLSHVSSSLGSNGKTSRSKKGSNKVKKLSSTVDLWTLLTQCAQAVGSYDQRNANDILKQIRQHSSAHGDGLQRLAHYFADGLEARLSAGTPMYKQLQSSSSADMLKAYKVYITASPFQRMSNFLANRTILGLAQNKSSLHIIDFGVFYGFQWPCLIQRLSEMPQGPPRLRITGIDLPQPGFRPAERVEETGRRLEKYCKRFGVPFEYNCLAQKWDTIRLEDLKIDREEVTVVNCLYRLKNLSDETVTANCPRDAVLRLIRKINPNIFIHGVVNGTYNAPFFLTRFREALFHFSSLFDMLEATVPREDPYRLMFEKGLFGRDAVNVIACEGAERVERPETYKQWQVRNKRARFKQLPLAPELVDRVKEMVKKEYPKDFVVDEDGKWVLQGWKGRILHAVSCWVPA* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2086 657 MobiDBLite consensus disorder prediction 248 277 - -
Tpr3g2086 657 MobiDBLite consensus disorder prediction 47 70 - -
Tpr3g2086 657 MobiDBLite consensus disorder prediction 248 271 - -
Tpr3g2086 657 ProSiteProfiles GRAS family profile. 278 655 IPR005202 -
Tpr3g2086 657 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 187 656 IPR005202 -
Tpr3g2086 657 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 29 130 IPR005202 -
Tpr3g2086 657 Pfam GRAS domain family 289 654 IPR005202 -
Tpr3g2086 657 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 29 130 - -
Tpr3g2086 657 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 187 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2086 Tpr-Chr3 19243226 19245914 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2086 11 656 GRAS Transcription Factor Family AT2G29060 43.215 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr3g2086 GRAS 3.6e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2086 - - lja:Lj3g3v3213190.1 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2086 3 19243226 19245914 Tpr3g2086 3 19243226 19245914 ECH