Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2085 ATGGATTATTCAAACTGTGATTATGAGTTTCAACAAGGTTCAATGGAAGACACTGATTTTTCAGAAACCATAAAGTTCATAACCCAAATCCTTATGGAAGAAAACTTTGACCAGAGACCTTTTTATGATCCACTTAGCTTACAAATCACACAAAAATCATTCTTTGATGCTCTTTCCCCCAATCAACACCCCTTAGATTTTCATAACTCTGATCAAAGAATCAGCACTAGTGATAGCTCAACAAAACCTCTTTCCCCTGATACTCCTGTTTCAGATCTTGGTACTAGTGTTAGTGATGGACTTGTAGATTTGGATTCTTCTATTACCAATTTGTTAGCACAAAACATTTTCAGTAATGCAGATTCTGTTTCCCAATTCAAGAGAGGTTTTGAAGAAGCCAACAAGTTTCTTCCTCCTCAGCCTCAACTCTTGACTAGTCTAGAATCATCCAACTTCAATATGGTTGAGGAGAAAGAGAATTCAGTTGTGTTGAAAGGTAGAAAGAATCACGATCGCGAAGAAGATGAAGAAGAGAGGAGAAATAACAAGCAATCAGCTATTGGTGGTGTTGTTGATGAGGATGAGTTATCGGAAATGTTTGATAAAGCTTTACTTAATGTCGAAAATGATTGCTTGCCGAATGAGAAGCTGGCTTCAACTAATGGAGCAAAGGCTCGTCCTAAGAAACGTAATAGCAAAAACGAAAGGGTTGATTTGAGAAATCTTCTGCTTCTGTGCTCACAAGCTTTGTATGCCAATGACAACAGGAATGCTAATGAACTACTGAAGACGATTAGGCAACATTCTTCGCCCTTTGGAGATGCATCACAGAGGGTGGCGCATTACTTTGCTGATGGAATTGAGGCACGCCTTGTAGGCGATGGAACCGGCACACAAACATTTTATTCCTCGCCGAGCACCAAGAGGATCACTGCTGCTGAGTTTTTGAAAGCATACCAAGTTCATTTTATTAGTCCTCCATTCAAAAAATTTGCATATTTGTTTGCAAATAAAATGATTATGAAAGTTGCTAAAAAGGCTGAAACCCTTCATATCATTGATTTTGGTATCCTTTATGGATTTCAGTGGCCGTTGCTTATTAAGTACTTATCAAATAGAGAAGGTGGACCTCCAAAGTTGAGAATCACTGGGATAGAGTTCCCTTTACCTGGCTTTCGTCCGACCGAAAGAATTGAGGAGACTGGTCGCCGTTTGGCCAACTACTGCAAGCGTTTCAGCGTTCCATTCGAGTACAATGTCATAGCGTCGCGGAACTGGGAAGAAATTCGAGTTGAAGATCTTAAAATTGAAAGCAATGAGGTAATCGCTGTGAACTGTATGACTAGGTTTAAGAATTTACTAGATGAGAGTATTGAAGTGAACAGTCCTAGAAATGGGGTTCTGCATTTGATTAGGAAGATAAATCCTGATATTTTTACTCTTTCCGTTATTAATGGATCGTATAATTCACCATTCTTTGCAACACGTTTTAAGGAGGCATTGTTTCATTTTTCTGCTATTTACGATTTGTTCGACGCTGTCATACCAAGGGAAAATGAATGGAGGACGATGATAGAGAGGGAAATTATAGGTAGGGAAGTTATGAATGTTGTAGCTTGTGAAGGTTTAGAGAGAGTTGAGAGGCCTGAGACATATAAACTGTGGCAGGTTAGGAATACTAAGGCTGGTTTCAAGCAGCTTCCATTGGATTCAGAATTAATGGCAAAATTTAGGACTAAGTTAAAGCAGTGGTACCATAGAGATTTTGATTTTGATGAAGACAACAATTGGATGCTTCAAGGTTGGAAAGGTCGTATTTTATATGCTTCAACTTGTTGGGTGCCTGCATAA 1851 0.3895 MDYSNCDYEFQQGSMEDTDFSETIKFITQILMEENFDQRPFYDPLSLQITQKSFFDALSPNQHPLDFHNSDQRISTSDSSTKPLSPDTPVSDLGTSVSDGLVDLDSSITNLLAQNIFSNADSVSQFKRGFEEANKFLPPQPQLLTSLESSNFNMVEEKENSVVLKGRKNHDREEDEEERRNNKQSAIGGVVDEDELSEMFDKALLNVENDCLPNEKLASTNGAKARPKKRNSKNERVDLRNLLLLCSQALYANDNRNANELLKTIRQHSSPFGDASQRVAHYFADGIEARLVGDGTGTQTFYSSPSTKRITAAEFLKAYQVHFISPPFKKFAYLFANKMIMKVAKKAETLHIIDFGILYGFQWPLLIKYLSNREGGPPKLRITGIEFPLPGFRPTERIEETGRRLANYCKRFSVPFEYNVIASRNWEEIRVEDLKIESNEVIAVNCMTRFKNLLDESIEVNSPRNGVLHLIRKINPDIFTLSVINGSYNSPFFATRFKEALFHFSAIYDLFDAVIPRENEWRTMIEREIIGREVMNVVACEGLERVERPETYKLWQVRNTKAGFKQLPLDSELMAKFRTKLKQWYHRDFDFDEDNNWMLQGWKGRILYASTCWVPA* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2085 616 MobiDBLite consensus disorder prediction 158 191 - -
Tpr3g2085 616 Pfam GRAS domain family 239 613 IPR005202 -
Tpr3g2085 616 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 12 615 - -
Tpr3g2085 616 MobiDBLite consensus disorder prediction 68 93 - -
Tpr3g2085 616 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 12 615 IPR005202 -
Tpr3g2085 616 ProSiteProfiles GRAS family profile. 230 614 IPR005202 -
Tpr3g2085 616 MobiDBLite consensus disorder prediction 160 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2085 Tpr-Chr3 19234194 19236375 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2085 8 615 GRAS Transcription Factor Family AT2G29060 47.402 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr3g2085 GRAS 9.2e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2085 - - gmx:100795855 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2085 3 19234194 19236375 Tpr3g2085 3 19234194 19236375 ECH