Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2084 ATGGATTATTCAAACTGTGATTATGAGTTTCAACAAGGTTATATGGAAGACACTGATTTTTCAGAAACCACAAAGTTCATAACCCAAATACTTATGGAAGAAAACTTTGATCTGAGACCCTATTATGATCCACTTAGCTTACAAATCACAGAAAAATCATTCTTTGATGCTCTTTCCCCCAATCAACACCCCTTACATTTTCATAACTCTGATCAAAGAATCAGCAGCACTAGTAATAGCTCAACGAAACCTCTTTCTCCTGATACCCTTGTTTCTGATCTTGGTACTCATGTTTTTCAGTTTATTTCCCCTCTTTCAACTAGTGTTAGTGATGGACTTGTTGATTTGGATTCTTCTATTACCAATTTGTTAGCACAAAACATTTTCGGAAATGCAGATTCTGTTTCCCAATTCAAGAGAGGTTTTGAAGAAGCCAACAAGTTTCTTCCTCCTCAGCCTCAGCTCTTGACTAGTCTAGAATCATCCAACTTCAATATATTCGAGGAGAAAGATAATTCAGTTGTGTTGAAAGGTAGAAAGAATCACGAGCGCGAAGAAGATGAAGAAGGGAGGAGAAATAACAAGCAATCAGCTATTGGTGGTGGTGTTGATGAGGATGAGCTATCAGAAATGTTTGATAAAGCTTTACTTAATGACGAAAATGATTGCTTTCCGAATGAGAACACGCCTTCAGCTGGTGGAGCTAAGGCTCGTCCTAAGAAACATAATAGCAAAAACGAAACGATTGATTTGAGGAATCTTCTGCTTCTGTGCTCACAAGCTTTGTATGCCAATGACAACAGGAATGCTAGGGAACTACTGAAGCAGATTAGGAAACACACTTCGCTCTTTGGAGATGCATCACAAAGGGTAACACATTACTTTGCTAATGGACTTGAGGCACGCCTTGTAGGTGAGGGAGCCGGTGCACAAACATTCTATTCCTCGCCAAGCACCAAGAGGATCACTGCTGCTGAGTTTTTGAAAACATACCAAGTTCATTTTATTAGTCCTCCATTCAACAAATTTGTGTATTTGTTTGCAAATAAAATGATTATGAAAGTTGCGGAAAAGGCTGAAACCCTTCATATCATTGATTTTGGTATCCATTATGGTTTTCAGTGTCCGATGCTTATTAAGTACTTATCAAATAGAGAAGGTGGACCTCCAAAATTTAGAATCACTGGGATAGAGTTCCCTTTACCTGGATTTTGTCCGACTGGAAGAATTGAGGAGACTGGTCGCCGTCTGGCCAACTACTGCAAGAGTTTCAGTGTTCCATTCGAGTACAATATCATAGCATCACAGAATTGGGAAAAAATTCGAGTTGAAGATGTTAGAATTGAAAGCAATGAGGTAATCTCTGTAAACTGTATGACAAGGTTTAAGAATTTAATAGATGAGAGCATCAAAGTGAACAGTCCTAGAAATGCGGTTCTGCATTTTATTAGGAAGATAAATCCTGATATTTTTACTCTTTCTGTTATTAATGGATCGTATAATTCACCATTCTTTGCAACACGTTTTAGGGAGGCATGA 1539 0.3821 MDYSNCDYEFQQGYMEDTDFSETTKFITQILMEENFDLRPYYDPLSLQITEKSFFDALSPNQHPLHFHNSDQRISSTSNSSTKPLSPDTLVSDLGTHVFQFISPLSTSVSDGLVDLDSSITNLLAQNIFGNADSVSQFKRGFEEANKFLPPQPQLLTSLESSNFNIFEEKDNSVVLKGRKNHEREEDEEGRRNNKQSAIGGGVDEDELSEMFDKALLNDENDCFPNENTPSAGGAKARPKKHNSKNETIDLRNLLLLCSQALYANDNRNARELLKQIRKHTSLFGDASQRVTHYFANGLEARLVGEGAGAQTFYSSPSTKRITAAEFLKTYQVHFISPPFNKFVYLFANKMIMKVAEKAETLHIIDFGIHYGFQCPMLIKYLSNREGGPPKFRITGIEFPLPGFCPTGRIEETGRRLANYCKSFSVPFEYNIIASQNWEKIRVEDVRIESNEVISVNCMTRFKNLIDESIKVNSPRNAVLHFIRKINPDIFTLSVINGSYNSPFFATRFREA* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2084 512 MobiDBLite consensus disorder prediction 177 194 - -
Tpr3g2084 512 ProSiteProfiles GRAS family profile. 242 512 IPR005202 -
Tpr3g2084 512 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 12 512 IPR005202 -
Tpr3g2084 512 Pfam GRAS domain family 251 512 IPR005202 -
Tpr3g2084 512 MobiDBLite consensus disorder prediction 177 203 - -
Tpr3g2084 512 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 12 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2084 Tpr-Chr3 19223442 19236495 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2084 17 512 GRAS Transcription Factor Family AT2G29060 43.654 1.84e-126 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr3g2084 GRAS 1.3e-66 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2084 - - gmx:100795855 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2084 3 19223442 19236495 Tpr3g2084 3 19223442 19236495 ECH