Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2083 ATGGATCCAAATTTTCCTCAAGCTTTCATAAATGGTTACTACCACTTTGATGAAGAAGGAAGCATAGTGGTTTCTGGGTCTGATCCAAATCAGTATGATAGTTTCCATGATGCTGATCCAAATCAGTATGATAACTTCCTTGATGCTGATCCAAATCAGTATGATAGCTTCCTTGATGCTGATCAACTTGGTTTTGCAGCCACCACTTTCCCTATAGAAGGTTCTATGGGCTTGGTGACAGATCCTTCCCTTGAAGATGCTGATTTTTCTGATACTGGAAAGTTCATAAACCAAATCCTGATGGAAGAAAACCTTGACCAGAGACCATTTTATGATCCACTTAGCTTGCAAATCACAGAAAAATCATTCTATGATGCTCTCTTACACCAAAATAAACCTCCTTCACCTAATCAACATCCCTTAGATATTCATCACTCTGATGGAACAAACAGCACCAGTAGTAACAACAATAGCAATAGTAATAGTAGTAGCAGTGACGACTCTCGAGAGATGATACCCCTTTCCCCTGATACTCCTGTTTCTGATCTTGGTGATCATGTTTTTCAGTTTAACTCCCCTTCCATTTCTCACACTTTCTCTCAACCTCATTCTACTAGTGATGCACTCAGAGATTTGGATTCTTCTATTACAAAGATGGCACAAAACATTTTCACTGATGTAGATTCTGTTTCCCTATTCAAGAAAAGTTTAGAAGAAGCCAACAAGTTTCTTCCTCCGCAGCCTCAACTCGTGACTGGTTTTGAATCATCCAATTTTAATATGGTTGAGGAGAAAGAGAAACCGTTTGTGTTGAAGGGTAGAAAGAATCACAAACGAGAAGAAAGTTATAGTAACGAAGAAGACGAAGAAGCTGCTAGGAGAAGTAGCAAACAATCAGCTATTAGTGTTGTTGACGAGGATGAATTATCAGAGATGTTTGATAAAGTTTTGCTTAATGTCGAACATTTGCCATTATGCAAGGGAAATGATTGCTCGCAGACTGGACAAGTGAAAACGGAGCAGTCGCCTCCATCTAATGGAGGGAAAGCTCGTCCTAAGAAAAAAGGCAAAAAAAAGGATACAATAGATTTGAGGAATCTTCTGCTTCTGTGTTCACAATCTGTGTATGCCAATGACAACAGGAATGCTAATGAACTACTGAAGCAGATTAGGCAACACTCTTCGGCCTTAGGAGATGCATCAGAGAGGGTGGCACATTACTTTGCCAATGGCCTTGAGGCACGCCTTGTTGGTAATGGTACTAATTCACAAGTGTTCTATTCTTCGCCAAGTTCCAAGAGGATCAGTACTGCTGAGTTTTTGAAAGCATATCAAGTTCATCTATCTAGTAGCCCATTCAAAAAGTTTGCATTCTTTTTTGCAAATAAAATGATTATGGATGTTGCTGAAAATGCTGAAACCCTTCATATCATTGATTTTGGTATCCTATATGGTTTTCAGTGGCCAATACTTATTAAGTTTTTAGCAGATAGAGAAGTTGGACCTCCAAAGCTGAGGATCACCGGGATAGAGTTCCCTTTGCCCGGCTTCCGTCCAATGGAAAAAATTGAGGAAACTGGCCGTCGTCTTGCTAACTATTGCAAGCGTTTCAATGTTCCCTTTGAGTTTAATGCCATAGCATCGCGGAACTGGGAAACAATTCGAGTTGAAGATCTTAAAATTGGGAGCAATGAGGTAGTTGTTGTGAACACTTTGATGAGGTTTAAGAATTTACTGGATGAAAGTATTGAAGTGAACAGTCCAAGAAACGCGGTTCTGCAATTGATCAGGAAGATAAACCCTGCTATTTTTACTCAGTCCATTGTTAATGGGTCATATAATTCGCCTTTCTTTGCTACACGGTTTAGGGAGGCACTGTTTCATTTTTCTGCTCATTTTGATATGTTTGACACTGTCATACCGCGTGAAAACGAACATAGGATGATGATGGAGAAGGAAAGTCTGGGTAGGGAGGCTATGAATGTTGTAGCATGTGAAGGTTTAGAGAGAGTTGAGAGGCCTGAGACATACAAACAATGGCAGGTTAGGAATACAAGAGCTGGTTTCAAGCAGCTTCCATTGAAGTCAAAATTAATGGACAAATTTAGGACAAAGTTAAGTCAGTACCATAAAGATTTTGTATTTGATGAAGACAACAATTGGATGCTTCAAGGTTGGAAAGGTCGCATTTTATATGCTTCAACATGTTGGGTGCCAGCATAA 2223 0.3963 MDPNFPQAFINGYYHFDEEGSIVVSGSDPNQYDSFHDADPNQYDNFLDADPNQYDSFLDADQLGFAATTFPIEGSMGLVTDPSLEDADFSDTGKFINQILMEENLDQRPFYDPLSLQITEKSFYDALLHQNKPPSPNQHPLDIHHSDGTNSTSSNNNSNSNSSSSDDSREMIPLSPDTPVSDLGDHVFQFNSPSISHTFSQPHSTSDALRDLDSSITKMAQNIFTDVDSVSLFKKSLEEANKFLPPQPQLVTGFESSNFNMVEEKEKPFVLKGRKNHKREESYSNEEDEEAARRSSKQSAISVVDEDELSEMFDKVLLNVEHLPLCKGNDCSQTGQVKTEQSPPSNGGKARPKKKGKKKDTIDLRNLLLLCSQSVYANDNRNANELLKQIRQHSSALGDASERVAHYFANGLEARLVGNGTNSQVFYSSPSSKRISTAEFLKAYQVHLSSSPFKKFAFFFANKMIMDVAENAETLHIIDFGILYGFQWPILIKFLADREVGPPKLRITGIEFPLPGFRPMEKIEETGRRLANYCKRFNVPFEFNAIASRNWETIRVEDLKIGSNEVVVVNTLMRFKNLLDESIEVNSPRNAVLQLIRKINPAIFTQSIVNGSYNSPFFATRFREALFHFSAHFDMFDTVIPRENEHRMMMEKESLGREAMNVVACEGLERVERPETYKQWQVRNTRAGFKQLPLKSKLMDKFRTKLSQYHKDFVFDEDNNWMLQGWKGRILYASTCWVPA* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2083 740 MobiDBLite consensus disorder prediction 329 346 - -
Tpr3g2083 740 MobiDBLite consensus disorder prediction 128 187 - -
Tpr3g2083 740 ProSiteProfiles GRAS family profile. 355 738 IPR005202 -
Tpr3g2083 740 MobiDBLite consensus disorder prediction 270 295 - -
Tpr3g2083 740 MobiDBLite consensus disorder prediction 131 171 - -
Tpr3g2083 740 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 78 739 - -
Tpr3g2083 740 MobiDBLite consensus disorder prediction 329 359 - -
Tpr3g2083 740 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 78 739 IPR005202 -
Tpr3g2083 740 MobiDBLite consensus disorder prediction 270 303 - -
Tpr3g2083 740 Pfam GRAS domain family 364 737 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2083 Tpr-Chr3 19216373 19221371 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2083 94 740 GRAS Transcription Factor Family AT1G07530 47.932 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr3g2083 GRAS 4.7e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2083 - - adu:107476834 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2083 3 19216373 19221371 Tpr3g2083 3 19216373 19221371 ECH