Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2080 ATGCAACTTCAGTTCAAAGAAACTAAGTCATTGCTTCAAAAGGAGCGCGAGGCTGCAAAAAGAGAAGCAGAGAGAGTGCTTGTCATACAGGAGACCTTGGTGACTTCATTGGAAAAGAAAATTGATGAAACAGAGAAAAGGTATGTAGAGGCAAATAAACTTAGTGAAGAAAGTTTGAAGCAAGCTTTGGATGCTGAGTCGAAAATAATCCAGTTGAAAACTTCTATGCGAAGAAAATTAAGGAGATCATACATTGAACGTCAACATGAAAATGGTGATTCCCTTATCAATTGTGTTATGAAAAATATTGGATTCCATCATGGAAAGCCTATTTCTGCATCCACCATTTACAAATGTCTTCTCCACTGGAAATCGTTTGAAGCTGAATGGACAAGTGTATTTGATCGCCTTATCCACATGATTGGTTCTGCAATTGAGAATCAAGACGACAGTGATCTCATGGCTTACTGGCTGTCAAATACATCTGCACTATTGTTTCTGCTCCCACAAAGTTTAAAATCCGGTGGTTCAAATGACGCAACCCCCGTTAGAAAACCACCAAATCCAACATCCCTCTTTGGCAGAATGACTATGGGTTTTCGGTCATCTCCTTCGTCTGCCAACCTTCCTACCCCATCGGAGGTTGTACGCAAAGTAAAGGCTAAGTATCCTGCTTTGCTTTTCAAGCATCAACTCACATCCTATGTGGTATCTCATATCTTGTGGGACAACTTGAAGAAAGAGTTGGCATCATTTATTTTGTTATGTATCCAGGCACCAAGAACATCTAAGGGAGTCTTAAGATCTGGCCAATCTTTTAGTGCCTCCTGTCCTTGTCCAAAAGATCTTCTCTCAAACATTTTCATATATTAA 873 0.3986 MQLQFKETKSLLQKEREAAKREAERVLVIQETLVTSLEKKIDETEKRYVEANKLSEESLKQALDAESKIIQLKTSMRRKLRRSYIERQHENGDSLINCVMKNIGFHHGKPISASTIYKCLLHWKSFEAEWTSVFDRLIHMIGSAIENQDDSDLMAYWLSNTSALLFLLPQSLKSGGSNDATPVRKPPNPTSLFGRMTMGFRSSPSSANLPTPSEVVRKVKAKYPALLFKHQLTSYVVSHILWDNLKKELASFILLCIQAPRTSKGVLRSGQSFSASCPCPKDLLSNIFIY* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2080 290 ProSiteProfiles Dilute domain profile. 135 290 IPR002710 -
Tpr3g2080 290 PANTHER MYOSIN-6 79 274 - -
Tpr3g2080 290 PANTHER MYOSIN-6 21 77 - -
Tpr3g2080 290 Coils Coil 27 61 - -
Tpr3g2080 290 PANTHER MYOSIN 21 77 - -
Tpr3g2080 290 PANTHER MYOSIN 79 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2080 Tpr-Chr3 19180694 19190220 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2080 1 278 Myosins gene family AT5G43900 45.109 8.28e-83 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2080 K10357 - gmx:100791070 339.732