Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2074 ATGAAGTGTTTCCATTTCTCAAACGGAGGATCAGAAAAACAACGAGTAGTAGGAGAAGACGAAGAAACTTCAGCATCAAGTTCAAGAGGTTCACGTGTCTCATGGGCGCGTTCCTTAAGCTTAATGGACACGCGCCGTTCCGAATACGATTCCGATTCACGTGACTTTTCCGATACTCTTGGTTTCCATGAGTTTCTCTCTCAACGCCGAGCTAATCATCTTAACATCTTTTCCTTCTCCGACCTCAAAATCGCTACTCGTGGATTCAATAGAGCTCTTTTGATTGGTGAAGGTGGTTTTGGTTCTGTTTATAGAGGAACCCTAAATCATCACTCTCATCGTTCTCAAATTGATGTTGCGATTAAACAGCTGAATCGTAATGGTCATCAGGGGCATAAGGAGTGGATTAATGAAGTGAATTTGTTAGGGGTAATTAAGCATCCAAATCTGGTGAGGTTAGTGGGTTATTGTGCTGAAGATGATGAAAGAGGGATTCAGAGACTTTTGGTGTATGAGTTTATGTCTAATAAGAGTTTGGAAGATCATCTTTTGGTTCGTGTTCCTTCGTCGGTTCTTCCATGGATTACTAGGTTAAGAATTGCTCAAGATGCAGCTCGTGGGTTGGCTTACCTACATGAAGAAATGGATTTTCAGCTAATATTTCGCGATTTTAAAACATCCAACATCTTGCTGGATGAGGACTTCAATGCAAAGCTTTCTGATTTTGGACTCGCTAGGCAAGGACCGTCAGAAGGGTTTGGCTATGTTTCAACAGCAGTTGTTGGCACCATAGGATATGCTGCACCAGAGTATGTTCATACCGGTAAGCTGACTGCTAAGAGTGATGTGTGGAGCTTTGGTGTAGTTCTTTATGAGCTTATCACTGGGAGGAGAGCCGTAGAAAGAAACCTACCAAGAAACGAACAAAAGCTTCTGGATTGGGTAAGACCTTATGTATCTGATTCTAGGAAGTTCCATCATATTGTTGATCCCCGACTTGAGGGACAGGATTGCACCAAATCAGCTCATAAACTTGCAATCCTAGCAAACAAGTGTCTGATGAAGCAGCCAAAATCTCGGCCAAAAATGAGCGAGGTAGTTGAGATTCTCGACAGCATTATCAACGAGACTGTTCCTGTCGATGAATGCGTTTCTGAAGTTGTTACTGAAACAGGAGAAGGAAATGAAGTTAATTTATCTGTAGAGGTCACTGAACCTGAACGAGCTAAACAGGGGAGTAATTATCTGAAGAAGGTTTTTTCAAGAGACAAGGTGAGCTTAAGAAATAAATCCATTGGAAGGTTTGATTGGAAAAATTGGGCGCCTGGACTTGTAAGAACTTGGTGA 1347 0.4202 MKCFHFSNGGSEKQRVVGEDEETSASSSRGSRVSWARSLSLMDTRRSEYDSDSRDFSDTLGFHEFLSQRRANHLNIFSFSDLKIATRGFNRALLIGEGGFGSVYRGTLNHHSHRSQIDVAIKQLNRNGHQGHKEWINEVNLLGVIKHPNLVRLVGYCAEDDERGIQRLLVYEFMSNKSLEDHLLVRVPSSVLPWITRLRIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDFNAKLSDFGLARQGPSEGFGYVSTAVVGTIGYAAPEYVHTGKLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLDWVRPYVSDSRKFHHIVDPRLEGQDCTKSAHKLAILANKCLMKQPKSRPKMSEVVEILDSIINETVPVDECVSEVVTETGEGNEVNLSVEVTEPERAKQGSNYLKKVFSRDKVSLRNKSIGRFDWKNWAPGLVRTW* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2074 448 Gene3D Phosphorylase Kinase; domain 1 63 173 - -
Tpr3g2074 448 SUPERFAMILY Protein kinase-like (PK-like) 71 370 IPR011009 -
Tpr3g2074 448 ProSitePatterns Protein kinases ATP-binding region signature. 95 122 IPR017441 GO:0005524
Tpr3g2074 448 ProSiteProfiles Protein kinase domain profile. 89 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2074 448 Pfam Protein tyrosine and serine/threonine kinase 95 370 IPR001245 GO:0004672|GO:0006468
Tpr3g2074 448 Gene3D Transferase(Phosphotransferase) domain 1 174 388 - -
Tpr3g2074 448 CDD STKc_IRAK 95 373 - -
Tpr3g2074 448 PANTHER SERINE/THREONINE-PROTEIN KINASE PCRK1 31 417 - -
Tpr3g2074 448 MobiDBLite consensus disorder prediction 1 29 - -
Tpr3g2074 448 PANTHER OS01G0588500 PROTEIN-RELATED 31 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2074 Tpr-Chr3 19102259 19105216 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2074 77 370 Glycoside Hydrolase AT3G07070 51.525 1.08e-96 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr3g2074 PK_Tyr_Ser-Thr 4.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2074 - - gmx:100811825 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2074 3 19102259 19105216 Tpr3g2074 3 19102259 19105216 ECH