Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2073 ATGGGAATTAGTATTGTTTCTGCCATGGGAGTTTGTTTGCGCAACCACGTCAAGGCTGAGAGCCCAATAGCCCCAATCAATTCAGTTTCAGGGTTAAATTCAAAGAGTGTGAATGTCAGTACAGAAAATATCAGTAGCCCATGTTGTAAGGTTCCTGATGATCTCAGTAGCTCAAGTAAGACTGGAGCACCAGCGGAATTGGTATTGGTCCCTCGGACTATTCGTGGTGAGGAGGAGATCTTGCAATCCTCCAATTTGAAGAGCTTTACTTCTACAGAACTTAAGGCTGCAACCAGAAATTTTCATGTAGACAGTGTGTTAGGAGATGATGGTATTGGATCTGTTTTTAAGGGTTGGATTGATGAACACTCAACTTCTGCTGCCAAACCTGGCAAAGGCATTGTTGTTGCTGTCAAAAGACTTAATCATGATGGCTTCAAAGGTCATAACGATTTGTTGGCTGAAGCCAACTATCTAGGCCAGCTTTCACATCCTCATCTAGTGAAATTGATTGGATATTGCCTTGAAGATGAAAACAGCTTCATGGTCTTTGAACTTATGCCACGTGGCAGCTTGGAGAATCACTTATTCATAAGAGGCTCATATTTTCAACCTCTTTCTTGGAACCTCCGTTTGAAGGTTGCTTTTGGTGCTGCAAAAGGCCTTGCATTTCTTCACAGTGCTGAAACAAAAGCGACATACCGTGATTTCAAGACTTCAAATGTCTTGCTAGATTCAAATTATAATGCAAAACTATCAAATTTTGGGCTGCCAAAGGGCGGGACTGCGGTTGATAAAAGTCATGTCTCCAACAAGCTAACCTACGGATATGCAGCTCCAGAATACCTGGCCACTGGTAATCACAGTGCTAAGAGTGATGTCTATAGTTTTGGAGTTGTCCTATTGGAAATATTATCAGGAAGGAGAGTTGTTGACAAGAATAGACCACAAAGACAACACAATTTGGTGGAATGGGCTAAGCCTTATCTATCCAACAAGCGCAAGATTTTACGCGTGTTGGATAATCGTCTTGAAGGCCAATATGAATTAGAAGATGTGTATAAGGTTGCTATACTCTCCCTACGGTGCCTTTCAATAGAAGCCAAGTTGAGACCAAACATGGACGAGGTTGTTACAAATTTGGAGCAGTTGCAGGTTCCAAATGTAAATAATCAGAATCGTTTACGTAGAAGAAGTACCGATGATGTTCCCCGTGTTAGAACAGCCGCAGCTTATCCCCAACGCGCTACTTCTATGCTTTGTACATGA 1269 0.4208 MGISIVSAMGVCLRNHVKAESPIAPINSVSGLNSKSVNVSTENISSPCCKVPDDLSSSSKTGAPAELVLVPRTIRGEEEILQSSNLKSFTSTELKAATRNFHVDSVLGDDGIGSVFKGWIDEHSTSAAKPGKGIVVAVKRLNHDGFKGHNDLLAEANYLGQLSHPHLVKLIGYCLEDENSFMVFELMPRGSLENHLFIRGSYFQPLSWNLRLKVAFGAAKGLAFLHSAETKATYRDFKTSNVLLDSNYNAKLSNFGLPKGGTAVDKSHVSNKLTYGYAAPEYLATGNHSAKSDVYSFGVVLLEILSGRRVVDKNRPQRQHNLVEWAKPYLSNKRKILRVLDNRLEGQYELEDVYKVAILSLRCLSIEAKLRPNMDEVVTNLEQLQVPNVNNQNRLRRRSTDDVPRVRTAAAYPQRATSMLCT* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2073 422 Pfam Protein tyrosine and serine/threonine kinase 103 381 IPR001245 GO:0004672|GO:0006468
Tpr3g2073 422 PANTHER OS01G0588500 PROTEIN-RELATED 52 394 - -
Tpr3g2073 422 Gene3D Phosphorylase Kinase; domain 1 76 186 - -
Tpr3g2073 422 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED 52 394 - -
Tpr3g2073 422 SUPERFAMILY Protein kinase-like (PK-like) 80 389 IPR011009 -
Tpr3g2073 422 Gene3D Transferase(Phosphotransferase) domain 1 187 405 - -
Tpr3g2073 422 ProSiteProfiles Protein kinase domain profile. 101 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2073 Tpr-Chr3 19096189 19099246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2073 77 381 Glycoside Hydrolase AT3G07070 42.532 4.72e-83 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr3g2073 PK_Tyr_Ser-Thr 9.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2073 - - mtr:MTR_4g063930 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4490 7 53568834 53571467 Tpr3g2073 3 19096189 19099246 PCT