Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2062 ATGGCGAAGACACTCATTTCATCTCCATCATTTCTCGGAACACCACTTCCTTCACTTCATCGTAAATTCTCCCCTAATAATCGTACTAGATTATTCACCAAAGTTCATTTCAGCTTCCATGAACTTCCTCCAATTCAATCCATAAATCATTCCATTGACTTCTCCAGTGTCTTCGCCAGAGCTGAAGGCCTTCTTTATACGCTCGCTGATGCCACTGTTGCGGCGGATGCTGCGGTTTCAACCGATGTTACTGTGCAGAAGAACGGAGGTTGGTTCGGGTTCATTTCCGATGGCATGGAGTTTGTTCTCAAGATTTTAAAGGATGGCTTGTCTGCCGTGCATGTGCCTTACTCATATGGATTTGCTATCATATTGCTCACCGTTATTGTTAAGGCTGCTACACTTCCCTTGACAAAGCAACAGGTTGAATCAACACTAGCTATGCAAACCCTTCAACCTAAAATTAAGGCCATTCAAGAAAGATATGCCGGCAATCAGGAAAGAATACAACTTGAGACTTCAAGGCTATATACCCAGGCTGGGGTTAACCCATTGGCAGGTTGTTTACCAACTTTGGCCACTATTCCAGTCTGGATTGGTCTATACCAAGCTTTATCTAATGTGGCAAACGAGGGACTGTTAACAGAAGGTTTCTTATGGATCCCTTCTCTGGGTGGTCCCACTAGTATTGCTGCTAAACAAAGTGGATCCGGAATTTCTTGGCTTTTTCCATTTGTGGATGGCCATCCACCTTTGGGTTGGCAAGATACTGCAGCATATCTTGTTTTACCTATTCTTCTTATCGTTTCTCAATATGTTTCAATGGAAATCATGAAACCACCTCAGACAAACGATCCTACTCAAAAGAATACACTTCTTATTTTCAAGTTCCTCCCACTCATGATCGGCTACTTCTCACTATCTGTGCCATCAGGACTAACAATTTACTGGTTTACGAATAACGTCCTGAGCACAGCTCAACAAATATGGTTGCGCAAATTAGGAGGTGCAAAGCCTGCTGTTAATGAAAATGCTGGTGGAATTATTACTGCAGGACAAGCTAAGAGATTAGCTTCTAAGCCAGAAAGGGGTGGTGAAAGGTTTGCACAATTAAAAGAAGAGGAGAAGAAGAAAAAGTTAAACAAGGCACTGCCAGTGGAGGAAGTTCAGCCTCTGGCTTCTGCTTCTGTTTCCGATGATGCCTCAGATGTAAAAAACGACAAGGAACAAGAAGTTACAGAAGATGCGTATGCTTCTAAAGTTAGCCAAGGCCAAGAGGTTAAAAGTGTTTCTAGGGAAAGAAGAAGTAAGCGTTCAAAGCGAAAGCCTGTTGTATGA 1338 0.4268 MAKTLISSPSFLGTPLPSLHRKFSPNNRTRLFTKVHFSFHELPPIQSINHSIDFSSVFARAEGLLYTLADATVAADAAVSTDVTVQKNGGWFGFISDGMEFVLKILKDGLSAVHVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQTLQPKIKAIQERYAGNQERIQLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAAKQSGSGISWLFPFVDGHPPLGWQDTAAYLVLPILLIVSQYVSMEIMKPPQTNDPTQKNTLLIFKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQIWLRKLGGAKPAVNENAGGIITAGQAKRLASKPERGGERFAQLKEEEKKKKLNKALPVEEVQPLASASVSDDASDVKNDKEQEVTEDAYASKVSQGQEVKSVSRERRSKRSKRKPVV* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2062 445 PANTHER OXA1 1 437 IPR001708 GO:0016021|GO:0032977
Tpr3g2062 445 Pfam 60Kd inner membrane protein 119 333 IPR001708 GO:0016021|GO:0032977
Tpr3g2062 445 MobiDBLite consensus disorder prediction 401 415 - -
Tpr3g2062 445 MobiDBLite consensus disorder prediction 391 445 - -
Tpr3g2062 445 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 1 437 - -
Tpr3g2062 445 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 118 332 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2062 Tpr-Chr3 18940583 18946762 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2062 26 389 Chloroplast and Mitochondria Gene Families AT2G28800 69.648 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2062 K03217 - gmx:100817173 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2062 3 18940583 18946762 Tpr3g2062 3 18940583 18946762 ECH