Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2035 ATGGATCCTTCAGAATTTCCTTTTGATATAGAAGCTTACAAAAGACAGTCTGAAATCGAAGAGAGGTATATCGTCAACCGGTTCAGGGAGCGACGAAACCAAATAAAGGAAGGATATACACCTCGTGTCAATAGAAAATATCTCAATAGAGATCATGCAGCAGCAAACCAAGGACTAACTAAGTGTTCGTCTCAAGATGAAAAAATAGACGCGAATGGGATCGCGGATCTTAAGAAACCATTATTGCAGATTCAAGAATGCCGAATCAAGATTAAGGGAATGACTTGCACAAGTTGTTCACAATCTGTTGAGCATGATTTGCAAATAGCTGAAGGAGTCAAAAAGGCAGTATAG 354 0.3927 MDPSEFPFDIEAYKRQSEIEERYIVNRFRERRNQIKEGYTPRVNRKYLNRDHAAANQGLTKCSSQDEKIDANGIADLKKPLLQIQECRIKIKGMTCTSCSQSVEHDLQIAEGVKKAV* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2035 117 Gene3D - 81 117 - -
Tpr3g2035 117 CDD HMA 89 116 IPR006121 GO:0046872
Tpr3g2035 117 SUPERFAMILY HMA, heavy metal-associated domain 83 116 IPR036163 GO:0046872
Tpr3g2035 117 ProSiteProfiles Heavy-metal-associated domain profile. 86 117 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2035 Tpr-Chr3 18619402 18622938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2035 85 116 Primary Pumps ATPases AT1G63440 59.375 1.39e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2035 K17686 - aof:109847733 105.145