Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2007 ATGGAAACACTTGGTGCATTGCTCACTATTAATGTGCACATTTTTATGCTAAGTTTATTATGCTTTATTGTTACAATTGAAGCTTCAAAGAAAAATAAGGTCTCTGCCATTTATGTGTTTGGAGACTCTACAGTAGATCCAGGAAACAATAATTATGTGAACACAGCTTTTAAAAGTGATTTTCCACCTTATGGTAGAGACCTTGCTAACCAAAGTCCTACTGGAAGGTTCTCAAATGGGAAGCTTGGCACTGATTTTATTGCTTCATATTTGGGCTTGAAAGAGTTGGTGCCACCATATTTGGATCCAAATCTCAGTGATGAAGAGCTTATGACAGGAGTTAGTTTTGCCTCTGCTGGTTCTGGTTTTGACCCACTCACACCAACTCTAAGTAATGTGGTCCCAATACCAAAGCAACTGGAATATTTCAAACAATACAAAAAGAGGTTGGAGAGTAAGCTTGGTAGGCATAAAACTGAAAATCATATAAACAATGCCTTTTTTTTCGTAAGCGCGGGTACAAATGACTTCGTTATTAATTATTTTACGGTACCAATAAGAAGAAGAAGCTTTGACGTTGTAACCTATGGCCATTTCGTGCTTCAACATGTCAAAGATTTCATACAGAATTTGTGGACAGAAGGTGCTAGAAAAATTGCTTTTGTTGGACTACCTCCAATGGGATGCTTGCCAATCATGATCACTTTCCATTCCAACAATGCTTTTTTTGAACGTAGTTGTGTAGACAAATATTCCGCTGTGGCAAGAGCTCATAATATGATTCTTCAACATGAATTGTTCTCAATGCAACTCAATTTCTCAATGCAACTCAATTTCTCTAATCCTCATGAACACGGTGCTAAGATCTCTTACATTGACATATATGGACCTTTAGCTAACATGATTCAAGGGCATGGAAATCTTGGATTTGATGAGGTTCATCGTGGGTGTTGTGGAAGTGGTTTCATTGAAGCAACATTTATGTGTAACCGTGGTTCGCATGTGTGCACTGATCCATCAAAATATGTATTTTGGGATTCAATACACCCTACAGAGAAGGCATACCATAACCTATTTGTCGCAAACCGTCACATCCTTGATGCCCTCATCAAGGGCTAG 1119 0.3834 METLGALLTINVHIFMLSLLCFIVTIEASKKNKVSAIYVFGDSTVDPGNNNYVNTAFKSDFPPYGRDLANQSPTGRFSNGKLGTDFIASYLGLKELVPPYLDPNLSDEELMTGVSFASAGSGFDPLTPTLSNVVPIPKQLEYFKQYKKRLESKLGRHKTENHINNAFFFVSAGTNDFVINYFTVPIRRRSFDVVTYGHFVLQHVKDFIQNLWTEGARKIAFVGLPPMGCLPIMITFHSNNAFFERSCVDKYSAVARAHNMILQHELFSMQLNFSMQLNFSNPHEHGAKISYIDIYGPLANMIQGHGNLGFDEVHRGCCGSGFIEATFMCNRGSHVCTDPSKYVFWDSIHPTEKAYHNLFVANRHILDALIKG* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2007 372 Pfam GDSL-like Lipase/Acylhydrolase 37 358 IPR001087 GO:0016788
Tpr3g2007 372 PANTHER GDSL ESTERASE/LIPASE EXL3 9 370 - -
Tpr3g2007 372 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 9 370 - -
Tpr3g2007 372 Gene3D SGNH hydrolase 24 367 IPR036514 -
Tpr3g2007 372 CDD SGNH_plant_lipase_like 36 372 IPR035669 -
Tpr3g2007 372 SUPERFAMILY SGNH hydrolase 163 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2007 Tpr-Chr3 18294462 18300184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2007 13 372 Pollen Coat Proteome AT1G75930 36.043 8.81e-58 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2007 - - gmx:100804919 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2007 3 18294462 18300184 Tpr3g2007 3 18294462 18300184 ECH