Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2000 ATGAAGAAGAATTCGAAGAGCAGCTGCAAGTCTGCATCACACAGGCTTTTTAAGGATAAGGCGAAGAATCGTGTTGATGATCTGCAGCTGATGTTCCTGGATTTGCAGTTTGCTAGGAAGGAGAGCCGTACGGTTGATGCTGCGGTCCTTGAGGAACAAGTCCATCAGATGCTTCGTGAGTGGAAGTCAGAGCTCAATGAGCCTTCTCCTGCTTCTTCTTTGCAGCAAGATGGAAGTCTTGGATCATTCTCCACCGATATCTGTCGGCTTTTGCAGCTATGCGAGGAGGAAGATGATGCCTCTAGTCCATTAGCCGCACCTAAGCCTGAACCTAATGACCAGACTCTGCAGACTGGGGGGAAGGTCGTGTTTCAAGAGGGCCAACAGCAACATGATTTCGCATTGGTTGATGAGCGTAAACAGTCAACCTCAGGAATTCAAAACGTGGCAACTATCAACCAGGATGGGCCTGCTTTAGAATATCCCCAGTTTGATTTACATCAGGACTTTGATCACGGCTTATACACTGGTTTCAATGGTACAGTTTATTCTGAGGAAGCTATTCCTCATATATCTAGCTACCTACCAAGTGCATGCCCTCCTCCATCTGCTTTTTTGGGCCCAAAGTGTGCACTTTGGGACTGTCCAAGACCCGCACAAGGGTTGGACTGGTGTCAAGACTATTGCAGTAGCTTTCATGCTGCTCTTGCTTTGAACGAAGGGCCACCAGGCATGGCTCCAGTTCTACGACCTGGGGGCATTGGTTTAAAGGATAATTTACTTTTTTCTGCTCTTAGTGCAAAGGCACAAGGAAAAGATGTTGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAGTCTCCATGGAATGCGCCTGAGCTCTTTGATCTTTCTGTTCTTGAGGGCGAGACTATTAGGGAATGGCTCTTCTTCGATAAGCCTCGAAGAGCATTTGAAAGTGGAAACAGAAAGCAGAGGTCATTGCCAGATTACAGTGGGCGTGGTTGGCATGAATCTAGAAAGCAAGTTATTAATGAATTTGGAGGTCTGAAGAGATCCTATTATATGGATCCACAACCACTCAACCATTTTGAATGGCACCTTTATGAATACGAGATTAGCAAGTGTGATGCATGTGCCTTATACCGTTTAGAACTAAAGCTTGTTGATGGGAAGAAGAACTCAAAGGCAAAATTAACAAATGATTCAGTTGCTGATCTGCAGAAGCAGATGGTAAAGCTCTCTGCCGAGTTTCCGCCTGATAACAGAAGGCCTGCCAAAGGCAGAGCCAAGATTAATGCCAAAGTTGGCATGGGTGCTGTCTATTCAGCTTCAAACAGAGTGACCCCACTAAACGGAACATACGAATATGGCTTAACTGCACCATATGACTATCTTGTCGAGAACATGGGCGACTATTATGGGACATGA 1431 0.4598 MKKNSKSSCKSASHRLFKDKAKNRVDDLQLMFLDLQFARKESRTVDAAVLEEQVHQMLREWKSELNEPSPASSLQQDGSLGSFSTDICRLLQLCEEEDDASSPLAAPKPEPNDQTLQTGGKVVFQEGQQQHDFALVDERKQSTSGIQNVATINQDGPALEYPQFDLHQDFDHGLYTGFNGTVYSEEAIPHISSYLPSACPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFSALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVINEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKNSKAKLTNDSVADLQKQMVKLSAEFPPDNRRPAKGRAKINAKVGMGAVYSASNRVTPLNGTYEYGLTAPYDYLVENMGDYYGT* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2000 476 PANTHER TRANSCRIPTION FACTOR VOZ1 1 476 IPR039277 GO:0006355|GO:0048578
Tpr3g2000 476 PANTHER TRANSCRIPTION FACTOR VOZ1 1 476 - -
Tpr3g2000 476 Coils Coil 397 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2000 Tpr-Chr3 18231609 18236950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2000 3 474 VOZ-9 Transcription Factor Family AT1G28520 70.040 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Tpr3g2000 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2000 - - gmx:100798565 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2000 3 18231609 18236950 Tpr3g2000 3 18231609 18236950 ECH