Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1991 ATGGATTTTAGTGCAAATGGTTCTGAAGAAACTGAACTGTATCATGCTCAAATCCATTTGTATAAACATGTATACAACTTTGTAAGTGCCATGGCGCTCAAATCTGCTGCGGAACTTGGCATAGCTGATGCAATCCATAACCATGGAAAACCAATGACTCTTACTGAATTAGCTTCATCTTTGAAACTCCACCCTTCTAAAGTTAACATCCTATATCGATTTTTGAGCCTGTTAACACACAACGGTTTCTTCGTTAAAAGCAAAGGGGAAGAAGAAGAAGAAGAAATAGCTTATGCTCTCACACCATCTTCAAAGCTTCTCATAAGTGGGAAATCAACATGTTTATCAGCACTTGTTACAGGAGCACTTCATCCAAATTCTATAGACATGTGGAGCTCTACAGAGAAATGGTTCAATGAGGATAAGGAACAAACTTTGTTTGAGTGTGCAAAAGGGGAGAACTATTGGGATTTTCTTAACAAAGATTCTGATAGATTGAGTATGTTTCAAGATGCTATGACTGCTGATTCGAGAATGTTCAAGCTTGCTCTTAAAGAGAACAAACATGTGTTTGAGGGTTTGGAGTCTCTTGTTGATGTTGCCGGTGGAACTGGTACAGTCACAAAACTCATCCATGAAGCTTTTCCTAACATCAAATGCACTGTTTTTGATCAACCACAGGTTGTTGGTAACTTAACCGGAAATGAAAATTTGAACTTTGTTGGTGGTGATATGTTCAAATCTATCCCTCCTGCAGATGCTGTTTTACTCAAGTGGGTTTTGCATGATTGGAATGATGAACTATCCTTAAAAATATTGAAGAACAGCAAAGAAGCTATTTCACACAAAGGAAAAGACGGAAAAGTGATTATTATCGACATATCGATTGATGAAACAAGTGATGATCATGGATTAACTGAGTTGCAATTGGAATATGATTTGGTGATGCTTACAATGTTTCATGGTAAAGAAAGAACAAAGACAGAATGGGACAAACTCATACATGATGCAGGTTTCAGTAGCTACAAGATTATCCCTATAAGTGGCTTCAAGTCTCTAATTGAAGTTTATCCTTAA 1077 0.3714 MDFSANGSEETELYHAQIHLYKHVYNFVSAMALKSAAELGIADAIHNHGKPMTLTELASSLKLHPSKVNILYRFLSLLTHNGFFVKSKGEEEEEEIAYALTPSSKLLISGKSTCLSALVTGALHPNSIDMWSSTEKWFNEDKEQTLFECAKGENYWDFLNKDSDRLSMFQDAMTADSRMFKLALKENKHVFEGLESLVDVAGGTGTVTKLIHEAFPNIKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPPADAVLLKWVLHDWNDELSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDHGLTELQLEYDLVMLTMFHGKERTKTEWDKLIHDAGFSSYKIIPISGFKSLIEVYP* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1991 358 Gene3D - 1 107 IPR036388 -
Tpr3g1991 358 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 5 358 - -
Tpr3g1991 358 PANTHER O-METHYLTRANSFERASE 5 358 IPR016461 GO:0008168
Tpr3g1991 358 Gene3D Vaccinia Virus protein VP39 108 358 IPR029063 -
Tpr3g1991 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 358 IPR016461 GO:0008168
Tpr3g1991 358 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Tpr3g1991 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 357 IPR029063 -
Tpr3g1991 358 PIRSF O-mtase 1 358 IPR016461 GO:0008168
Tpr3g1991 358 Pfam O-methyltransferase domain 131 340 IPR001077 GO:0008171
Tpr3g1991 358 SUPERFAMILY "Winged helix" DNA-binding domain 11 111 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1991 Tpr-Chr3 18120043 18122039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1991 28 356 Monolignol Biosynthesis Gene Families AT5G54160 33.923 4.46e-45 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1991 K22588 - ag:AAC49856 598.586