Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1985 ATGGTAAAAATTGATGAATCTCTAGATGTTGATTCGAATGAAGTTAGTTCAACCGATAGTCATACATCTGATGATGAGGATTCCAGCTATTCGGTGTCCGGTGGGCATGATAGGTCAGATGATGGCGATGATACTGGTGACCACCATGATGATGATGATGATGATGGTGATGATGATGATGATGATGATGACCATGATTTTGGTGATGAAGCATCTATAGGTGAAAGAGCGGTACGTATTAATTCTATGACTGCTGATGAAATTCGTGGTATGGAATTTGGTAGTGTTGACGAAGCTTATGAATTTTATTATCAATACGGTAAATGTAAAGGTTTTTCCGTTAGGAAAAGTGATGATAAGAAAAAAATAGGGCCTGATGGTAGTAAAATAATAACAAACAAGCTTTTTGTATGCAGTAGACAAGGTTTACGAGATAAGAGACACATATCTAGGTTAGATAGGAAAAGAGAGCATAGACGTTTGACACGTACGAAATGCACGGCTAGGTTTCGTGTGACATACAAAGCCGATAAAGGTAGATTTGTAGTGTCTGTGTTTGAAGAGACTCATAACCATGAATTAACATCAGCTAGGTTTGTGCACTTACACCCGGTTTATCGTAAAATTAGCGAAGCAGATAGAGCTCAGGTTGATGGTATGCAGTCACGTGGAATTAGAACTTGTCATATTATGGGGTACATGGTTGCTCAGAAGGGTGGATATGGTGGTGTTGGGTTTACGAAGAAAGATCTTTATAATTATTTTGATAAAAAAATGCGTGATATTGTTAAAGATGGTGATGTTGCCGCATCGCTACATTATCTTAATGCAAAGTCAGCTACTGATCCCATGCTCTATGCTGAATATGCTGCTGACACTAGCAATGGACGGATGAAGTCTCTTTTTTGGGCTGATGGGACCAGTAGATCTGACTACTTCTGTTTTGGAGATGTGGTTGCATTTGACACAACATACAAGAGGAACAAATACAACCTCCCGCTGGTTATATTTTCAGGTTGTAACCACCATTCCCAAACAATAATTTTTGGCGCTGCGTTGGTATCAGATGAAACCACGGAGACGTATAAGTGGGTGTTGAATTGTTTTTTGGAGTGTATGGAAAATAAACGCCCAAAAGCTGTGGTGACAGATGGAGATGGGGCTATGAGGGAGGCTATAAAAGAGGTTTTCCCCGATGCGACCCATCGGTTATGTGCCTGGCATTTGAATAAGAATGCAGGTGAGAATGTGAAGAATTCAGGTTTTTTGAAGGGATTTAAAAAAGCCATGTTCTCAAATTTTTCAAAGGATGATTTTGAAGAGTATTGGTCAGAGATGATTAAAGAAAATGGAGTTGAAGGACATCCTTGGGTTATCAAAACCTACGAGAACAAGTTACTATGGGCAACTGCATACCTGCGGGATAAGTTTTTTGGACGTATAAGAACTACGTCTCAATGTGAAGCAATCAATGCAATAATAAAGAGTTATGTCAGAAAGAAAGGATGCATCTTTGAATTTATGCAAAATTTTGAGCAGGCTCTAAGAGGCTACAGAAACAATGAACTTGTTGAAGATTTTAAGTCAAAGTTTTCAGAACCTGTGTTGACAACTCAATTACGTTTGATTGAGAGCAATGCCGCTAAAATCTATACAGCGGAGATTTTCAAAGAAGTGAAAGAAGAAATTATGAAGGCCGGTGAATTGATTGTTAAGCATAAAAAGGAAATTGGAGATACTAAGTTTTATACTTTGACTAAATATTGTCGGGATGTGTATGAAAGAACAGTTGTTTACGATGGTGATACATTCCAATGTTCGTGCCGGTTGTTTGATTCTCGTGGACTTCCTTGTTCTCATATTTTTCACGTGATGAAGGAAGAACATGTTGATCACATTCCTAGCACTTTGGTATTGTCGCGATGGACCAAGGATGCTAAAATTGATTATTTGAACATGGTGGATGTTAATGATCCAGTTGATTCCGATGTGATTGAGCTTGCCCGTTTTGGTGCATATTGTTCTGTTCTGACATCATTTTGCAAAGAAGCTTCTAAAAAGAATGGTGTGTATGGTGACATTATGGATGACCTCATGAATTTAAAAAAAAAATATTGCAGTGTTGAGGATCCTATTGGAACACAAAAGTCAGTTGTTGGTGATCCTATCCCGGTTCAGAGTAAAGGTGCTCCAAAGAAAAAAAAGAATGACGCAAAAGCTCTCAGGCATTGTACTCATTGCAAGAGTACAACTCATAATGCGAGGACTTGTTCGGACAAAAAGAGAAAAAAAAGTTGCAACGCTGAAAGTAGTGTGCAAGACATAAATTCAGAGCTACCGGTTGACGTTGGTGAAAGTAGTGTGCGACAGAAAAAGAAGAAATGTGCAGAGCAACCGAAAGACCTTTGCGAAAGTAGAGTGGCACCAAAAAAGAAGAAATGTTCAGAGCTACCGAAAGATCGTTGTGAAAGTATTGTGCAAAAGAAAAATAAATGTTCGGTGCAACTGAAAGAGCGTGGCGCTAATGTGTCAACACCAACACATATTGATGTTACTAGTGCGACCGGGCAATTCACTCCGATGTATGGATTTCAACATATGATTCCTATGTTACATCCGGTTATGCAACAGATGCACGTACCATCTGGACAACATGTTCCACCTGCACAACATGTAACTTCTGTACCACATGTACCACCTATATACCAAATGTATGGAATGAATGTTGGTGCAAATTCAACTTCGTGTTATGGTCTGTTACAACATGTGATGAAATCTGCTGATGGACAACAATGA 2796 0.3895 MVKIDESLDVDSNEVSSTDSHTSDDEDSSYSVSGGHDRSDDGDDTGDHHDDDDDDGDDDDDDDDHDFGDEASIGERAVRINSMTADEIRGMEFGSVDEAYEFYYQYGKCKGFSVRKSDDKKKIGPDGSKIITNKLFVCSRQGLRDKRHISRLDRKREHRRLTRTKCTARFRVTYKADKGRFVVSVFEETHNHELTSARFVHLHPVYRKISEADRAQVDGMQSRGIRTCHIMGYMVAQKGGYGGVGFTKKDLYNYFDKKMRDIVKDGDVAASLHYLNAKSATDPMLYAEYAADTSNGRMKSLFWADGTSRSDYFCFGDVVAFDTTYKRNKYNLPLVIFSGCNHHSQTIIFGAALVSDETTETYKWVLNCFLECMENKRPKAVVTDGDGAMREAIKEVFPDATHRLCAWHLNKNAGENVKNSGFLKGFKKAMFSNFSKDDFEEYWSEMIKENGVEGHPWVIKTYENKLLWATAYLRDKFFGRIRTTSQCEAINAIIKSYVRKKGCIFEFMQNFEQALRGYRNNELVEDFKSKFSEPVLTTQLRLIESNAAKIYTAEIFKEVKEEIMKAGELIVKHKKEIGDTKFYTLTKYCRDVYERTVVYDGDTFQCSCRLFDSRGLPCSHIFHVMKEEHVDHIPSTLVLSRWTKDAKIDYLNMVDVNDPVDSDVIELARFGAYCSVLTSFCKEASKKNGVYGDIMDDLMNLKKKYCSVEDPIGTQKSVVGDPIPVQSKGAPKKKKNDAKALRHCTHCKSTTHNARTCSDKKRKKSCNAESSVQDINSELPVDVGESSVRQKKKKCAEQPKDLCESRVAPKKKKCSELPKDRCESIVQKKNKCSVQLKERGANVSTPTHIDVTSATGQFTPMYGFQHMIPMLHPVMQQMHVPSGQHVPPAQHVTSVPHVPPIYQMYGMNVGANSTSCYGLLQHVMKSADGQQ* 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1985 931 MobiDBLite consensus disorder prediction 46 62 - -
Tpr3g1985 931 Pfam FAR1 DNA-binding domain 101 195 IPR004330 -
Tpr3g1985 931 MobiDBLite consensus disorder prediction 1 62 - -
Tpr3g1985 931 ProSiteProfiles Zinc finger SWIM-type profile. 593 629 IPR007527 GO:0008270
Tpr3g1985 931 MobiDBLite consensus disorder prediction 18 45 - -
Tpr3g1985 931 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 87 755 IPR031052 GO:0006355
Tpr3g1985 931 SMART 26again6 604 631 IPR006564 GO:0008270
Tpr3g1985 931 PANTHER OS02G0262500 PROTEIN 87 755 - -
Tpr3g1985 931 Pfam MULE transposase domain 318 412 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1985 Tpr-Chr3 17996749 18000518 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr3g1985 FAR1 1.5e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1985 - - ccaj:109792835 880.552