Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1984 ATGAGAGAACAAAAACTAATAACTTTCATTTACATTGTTCTATCAATCTTATCTTTATCAACAACAACAGTAACATCATTGAACCAAGAAGGGTTGTACCTGTACCAATTTAAGCTTACCTTAGACGATCCAGACTCATCACTTTCCTCATGGAACCCAAGAGACACAACACCATGTAACTGGTACGGTATAATCTGCGACACCACAAACACCACCGTAACAGAAATCAACCTCTCCGACACAAACATTCAAGGTCCATTCACAGCTTCAATTCTCTGCCGTCTACCTAATCTATCTTCCATAAACCTCTTCAACAACTCCATTAACCAAACGTTCCCTCTCCAAATCTCTCTATGTAACAACCTCATCCATCTCGATCTCTCCCAGAATCTCCTCACTGGTCCTCTCCCTCAAACACTCTCTCTCCTCCCTAACCTACGTTATCTCGACCTCACTGGAAACAATTTCTCCGGTTCAATTCCTGGTTCCTTCGGAACATTCCAGAATCTCGAGGTTTTATCGTTAGTCTCGAATCTTCTAGAAGGTACTATTCCTCCCTCACTTGGTAACATATCAACCTTAAAAATGCTTAATCTATCTTACAACCCGTTTTTCCCGGGTCGGATTCCGTTAGAGCTTGGAAATTTAACTAACCTTGAAGTTCTATGGTTAACACAATGTAATCTCGTTGGTGTTATTCCTGAAACGCTTGGGAAACTTAAGAAGCTTAAAGATTTAGACCTTGCGTTGAACGATTTATATGGTTCTATACCGAGTTCACTCACTGAGTTAACTAGTTTGAGACAGATTGAGTTGTATAATAACTCGTTGTCTGGTGAGTTGCCTCGGGGAATGGGGAATCTTACTTCGTTGAGGCTACTTGATGCTTCGATGAATCATTTAACGGGGAGGATTCCGGTGGAGCTTTGTTCGTTACCGTTGGAGAGTCTTAATTTGTATGAGAATCGTTTTGAAGGTGAGTTACCGGCGAGTATAGCTGACTCGCCGAATTTGTATGAGTTGAGATTGTTTGGAAACCGGCTTACCGGAAAGTTACCGGAGAATCTTGGGAAACGTTCTCCGTTGAGGTGGCTTGATGTTTCGAGTAATCAGTTTTGGGGGAGTATTCCGGCGAGTTTGTGTGATCTTGGTGAGTTGGAGGAGCTTCTTATGATATATAATTTGTTCACCGGTGAGATTCCGGCGAGTTTGGGGACGTGTCAGAGTTTGACGCGCGTGCGTTTAGGTTATAATAGGTTTTCCGGTGAGGTTCCCGCGGGGATCTGGGGTCTACCTCATGTGTATTTGCTTGAGCTTGCTCATAACTCGTTTTCCGGTTCCATTTCGAAGACTATTGCCGGAGCAGGGAACCTTTCGTTGTTGATTTTGTCGACGAACAACTTCTCGGGAAATGTTCCCGATGAGGTTGGGTGGTTGGAAAATCTTGTCGAGTTTTCAGCCGGTGATAACATGTTCAGTGGCGCACTTCCTGATAGTTTGGTGAATCTTAACCAGCTTGGGATTCTTGATTTTCACAACAATAGGCTTTCTGGGGAATTACCAAAGGGGATTCATTCTTGGAAAAAGCTCAACGATTTGAATTTGGCTAACAATGGGATTGGTGGGAAGATTCCTGATGAAATCGGTAGCTTATCTGTGCTTAATTTTCTCGATCTTTCTCGGAATCAATTTTCCGGGAAAATCCCTCATGGATTGCAGAATCTTAAGCTCAATCAGCTGAACTTGTCGTATAATCGTCTTTCGGGAGAACTTCCTCCTCAGTTGGCTAAGGAAATGTACAAGTCTAGTTTCCTTGGTAATCCTGGTTTGTGTGGAGATTTGAAAGGTTTGTGTGATGGTAGAAATGAAGTAAAGAACTTGGGTTATATTTGGTTGCTTCGAGTAATTTTCCTTGTTGCTATTTTGGTGTTACTGGTAGGTGTTGTCTTGTTCTACTTTAGGTACAAGAATTTCAAGGATGCGAAAAGGGCTATTGATAAATCGAAATGGACTTTGATGTCGTTTCATAAACTGGGTTTTGGTGAAGATGAGATTTTGAATTGTCTTGATGAAGATAATGTCATTGGAAGTGGTTCATCCGGGAAGGTTTACAAGGTTGTACTTAATAGTGGAGAAGCTGTTGCTGTGAAGAAGATATGGGGAGGTGTTAGGAAGGAAGTGGAGAGTGGAGATGTCGAGAAAGGTAGGGTTCAAGACAATGCTTTTGATGCAGAAGTCGAAACTCTAGGAAAAATCAGACACAAGAACATTGTCAAGCTATGGTGTTGTTGTACCACTAGGGACTCCCAGCTTTTGGTTTATGAGTATATGCAAAATGGTAGTCTTGGTGATTTGCTTCATAGCAGTAAAGGAGGGTTGTTGGAATGGCCAACTAGATACAAGATAGCCGTCGATGCTGCAGATGGACTCTCTTATCTGCATCATGACTGCGTTCCCCCAATTGTTCATAGAGATGTTAAATCTAACAATATCTTGTTGGATGGGGACTTCGGTGCAAGGGTGGCAGATTTTGGATTAGCTAAGGTTGTCGAAACCACAGGAAAAGGGATTAAATCCATGTCCATCATTGCTGGTTCTTGTGGCTATATTGCACCAGAATATGCATACACACTCAGAGTGAATGAGAAGAGCGACATTTATAGTTTTGGTGTTGTTATACTTGAGCTGGTTACCGGAAGACGCCCAGTGGATCCTGAATTTGGAGAGAAAGATTTAGTCAAGTGGGTTTGCACTACTTTGGATCAAAAAGGTGTGGATCATGTACTTGACTCAAGGCTTGATTCATGTTTCAAAGAAGAAATTTGCAAGGTCTTCAACATTGGCCTCATGTGTACTAGTCCTCTTCCAATCAACCGGCCTTCAATGAGAAGAGTAGTGAAGATGTTGCAAGAAGTAGGAATAGAGAACCAAATGAAACCTGCCAAGAAAGATGGAAAATTAACACCTTATTACTATGATGATGCATCAGATCATGGAAGTGTTGTTTGA 3009 0.4191 MREQKLITFIYIVLSILSLSTTTVTSLNQEGLYLYQFKLTLDDPDSSLSSWNPRDTTPCNWYGIICDTTNTTVTEINLSDTNIQGPFTASILCRLPNLSSINLFNNSINQTFPLQISLCNNLIHLDLSQNLLTGPLPQTLSLLPNLRYLDLTGNNFSGSIPGSFGTFQNLEVLSLVSNLLEGTIPPSLGNISTLKMLNLSYNPFFPGRIPLELGNLTNLEVLWLTQCNLVGVIPETLGKLKKLKDLDLALNDLYGSIPSSLTELTSLRQIELYNNSLSGELPRGMGNLTSLRLLDASMNHLTGRIPVELCSLPLESLNLYENRFEGELPASIADSPNLYELRLFGNRLTGKLPENLGKRSPLRWLDVSSNQFWGSIPASLCDLGELEELLMIYNLFTGEIPASLGTCQSLTRVRLGYNRFSGEVPAGIWGLPHVYLLELAHNSFSGSISKTIAGAGNLSLLILSTNNFSGNVPDEVGWLENLVEFSAGDNMFSGALPDSLVNLNQLGILDFHNNRLSGELPKGIHSWKKLNDLNLANNGIGGKIPDEIGSLSVLNFLDLSRNQFSGKIPHGLQNLKLNQLNLSYNRLSGELPPQLAKEMYKSSFLGNPGLCGDLKGLCDGRNEVKNLGYIWLLRVIFLVAILVLLVGVVLFYFRYKNFKDAKRAIDKSKWTLMSFHKLGFGEDEILNCLDEDNVIGSGSSGKVYKVVLNSGEAVAVKKIWGGVRKEVESGDVEKGRVQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDSQLLVYEYMQNGSLGDLLHSSKGGLLEWPTRYKIAVDAADGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARVADFGLAKVVETTGKGIKSMSIIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRRPVDPEFGEKDLVKWVCTTLDQKGVDHVLDSRLDSCFKEEICKVFNIGLMCTSPLPINRPSMRRVVKMLQEVGIENQMKPAKKDGKLTPYYYDDASDHGSVV* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1984 1002 Gene3D Ribonuclease Inhibitor 206 314 IPR032675 -
Tpr3g1984 1002 Pfam Leucine rich repeat 96 156 IPR001611 GO:0005515
Tpr3g1984 1002 ProSiteProfiles Protein kinase domain profile. 689 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1984 1002 ProSitePatterns Protein kinases ATP-binding region signature. 695 718 IPR017441 GO:0005524
Tpr3g1984 1002 SUPERFAMILY RNI-like 75 441 - -
Tpr3g1984 1002 SMART serkin_6 689 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1984 1002 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 984 - -
Tpr3g1984 1002 ProSitePatterns Serine/Threonine protein kinases active-site signature. 821 833 IPR008271 GO:0004672|GO:0006468
Tpr3g1984 1002 Gene3D Phosphorylase Kinase; domain 1 673 776 - -
Tpr3g1984 1002 SUPERFAMILY L domain-like 362 611 - -
Tpr3g1984 1002 Gene3D Ribonuclease Inhibitor 26 205 IPR032675 -
Tpr3g1984 1002 SUPERFAMILY Protein kinase-like (PK-like) 685 970 IPR011009 -
Tpr3g1984 1002 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Tpr3g1984 1002 Gene3D Transferase(Phosphotransferase) domain 1 777 993 - -
Tpr3g1984 1002 Pfam Protein kinase domain 691 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1984 1002 PANTHER LRR RECEPTOR-LIKE KINASE 4 984 - -
Tpr3g1984 1002 SMART LRR_typ_2 167 191 IPR003591 -
Tpr3g1984 1002 SMART LRR_typ_2 551 574 IPR003591 -
Tpr3g1984 1002 SMART LRR_typ_2 95 119 IPR003591 -
Tpr3g1984 1002 SMART LRR_typ_2 503 526 IPR003591 -
Tpr3g1984 1002 SMART LRR_typ_2 383 407 IPR003591 -
Tpr3g1984 1002 SMART LRR_typ_2 143 166 IPR003591 -
Tpr3g1984 1002 SMART LRR_typ_2 264 288 IPR003591 -
Tpr3g1984 1002 SMART LRR_typ_2 216 239 IPR003591 -
Tpr3g1984 1002 Gene3D Ribonuclease Inhibitor 315 621 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1984 Tpr-Chr3 17996615 18032278 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1984 23 1002 Receptor kinase-like Gene Family AT1G28440 71.429 0.0 1424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr3g1984 Pkinase 9.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1984 - - gmx:100819887 1677.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1984 3 17996615 18032278 Tpr3g1984 3 17996615 18032278 ECH
Tpr7g3024 7 37453585 37458818 Tpr3g1984 3 17996615 18032278 ECH