Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1978 ATGGAGTCACGAGTGTTGTCACGCGCCACCACTCTCTGTTCCCTCCCTCGTCTCAACAAACTTCATCGGGAAAATCTCGCCACCAATGCTTCACTCCTCTCCGTGAAATCGATCGGATCAGTTTCCGATGGCGGGAACCTTGTTTGGGGAAGACAACTTCGTCCGGAGTTGTGTTCACCGGCGCTTAAGAAAAGTGCTGTGCTACTCCGTCCTTGTCTCGCCGCTGCTGAGGGAAAAGATTCCGCCGGAGAAGAGAAGGTGGCTCCGACCGGGTTTTTTAGCCGGTATCCGGCTCTTGTTACCGGTTTTTTCTTCTTCACTTGGTACTTTTTGAATGTGATTTTCAACATTCTCAACAAGAAGATCTATAATTATTTCCCCTATCCTTACTTCGTGTCGGTTATCCATTTACTTGTGGGAGTGGTTTACTGTTTGATAAGCTGGACCGTGGGCCTTCCTAAGCGCGCTCCAATAGATGCCAACCTGCTTAAGTTGCTGATTCCAGTAGCTGTGTGTCATGCATTAGGCCATGTGACTAGCAATGTCTCATTTGCTGCAGTTGCTGTTTCTTTCACACATACCATTAAAGCTCTTGAGCCATTCTTTAATGCTGCTGCTTCACAGTTCATACTTGGACAATCCATTCCTATCACTCTATGGCTCTCACTAGCTCCAGTTGTTCTTGGTGTGTCACTGGCATCTTTGACTGAGCTCTCATTCAACTGGCTGGGATTCATAAGTGCTATGATTTCAAACATTTCATTTACATACAGGAGTATCTATTCAAAGAAAGCCATGACTGATATGGATAGTACCAATATCTATGCCTACATTTCAATCATTGCTCTAATTGTCTGCATACCACCAGCCTTAATTCTGGAAGGGCCTACACTGTTGAAGACCGGCTTCAATGATGCAATTGCTAAAGTAGGTTTGGTCAAGTTTGTATCAGATCTCTTTTGGGTTGGTATGTTTTACCATCTCTACAACCAGGTGGCCACCAACACACTGGAGAGAGTTGCTCCTCTTACTCACGCAGTTGGCAACGTACTCAAACGTGTATTTGTTATCGGATTTTCAATAATTATCTTCGGTAACAAGATTTCCACCCAAACTGGCATAGGAACTGCCATTGCAATTGCTGGAGTAGCACTCTACTCCTTCATCAAAGCGCAGATTGAGGAAGAGAAGCGACAAGCAAAAGCAGCATAA 1212 0.4497 MESRVLSRATTLCSLPRLNKLHRENLATNASLLSVKSIGSVSDGGNLVWGRQLRPELCSPALKKSAVLLRPCLAAAEGKDSAGEEKVAPTGFFSRYPALVTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLLVGVVYCLISWTVGLPKRAPIDANLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVLGVSLASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPPALILEGPTLLKTGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTAIAIAGVALYSFIKAQIEEEKRQAKAA* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1978 403 PANTHER BNAC02G47130D PROTEIN 12 395 - -
Tpr3g1978 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 319 388 - -
Tpr3g1978 403 PANTHER SOLUTE CARRIER FAMILY 35 12 395 - -
Tpr3g1978 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 143 236 - -
Tpr3g1978 403 Pfam Triose-phosphate Transporter family 100 387 IPR004853 -
Tpr3g1978 403 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 99 397 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1978 Tpr-Chr3 17879215 17883279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1978 1 401 Antiporters AT5G46110 77.778 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1978 K15283 - gmx:732611 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1978 3 17879215 17883279 Tpr3g1978 3 17879215 17883279 ECH