Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1974 ATGGAAGGTGAGGCTAGTTCGGAGGGGGATAGTGATCGGAAAAGGGGTGGTGGTGGTGGTGGTGATGATAACAGCGATGAGAATAACAACAATAAGAACAATAACGATGGAAGCAATAGCAAAATTGCGGTTTCTAATGAGGGGCAAAGCAAACCTAAACGACAGATGAAGACGCCGTTTCAGCTTGAAACCCTTGAGAAAGCTTATGCTTTGGATAATTACCCTTCGGAGCCGGTGAGGATCGAGTTGTCTGAGAAATTGGGGTTGACGGATCGACAGCTGCAGATGTGGTTTTGCCATAGGAGGTTGAAGGATAAGAAGGAATCGGCTCCCAAGAAGGCGCCACCACCACGGAAGACAGTGGTGGAGCCTTTGCCGGATTCCCCGGTGGATGACCTCAGAATGGGCTCTGAGCATGGTAATGGGTATGGATCAGGGTCGGGTTCAGGTTCCAGTCCGTCTACCCGGTTGGAGGGTCGGAATGCAATGCCCTTGAGTGTTGGTTATTACGAGTCTCCGCAGGTTGAAATGGAGCTTAGAGCAATTGCTTGTGTGGAGGATCAGTTAGGTGAACCATTGAGGGAAGATGGACCCATTCTAGGAGTGGAGTTTGATCCATTGCCACCAGATGCTTTTGGGGCACATATAGAACACCAGAAGCGACCTCGTCTTACCTATGACGGGAAAATGTATGGAAGACATGATGTCAGAACAAACAAGGCTATGTCAAGGACATCCCATGAATATCAATATCTACCAAACCAGTCTGGCAATAAATCCGATGCTTTTGGACAGTTCGGCCAATCTCATTTACATACTCCGAAGGAGGGTCCTTCGAGAAACTCTCCACTACCTAGAATTCATGCCACCAAGGGTCATTCTTCTCGTGTTTCTCTTTTGTCTCAACAAGACAAGAAAGGGAGTCCCTACCTATCTCCTCCTCTGGATGATGATGTTGCCCCTACACAGGAAGTGTACACAAACATGGCGAATGTTGGAATGAACTCCCACCAAACTGATTGCCAAACTGGTGGGTCAGAAAATCCCTATGCTTCACCCAGTGGACAAATTTTGCAAAACAATGCAACGCATAACGAGAGAAAACGGAAGGGTGATGATGGCAAAATTACAAGGGATGTTGAAGCCAATGAGATGAGAATCCAGAAAGATCTCGAAAAACAAGATAACCTTAGAAGAAAGAATGAGGAGCGGATAAGGAAAGAAATGGAGAGACAAGATCGTGAAAGAAAAAAGGAAGAAGAGAGATTGATGCGTGAGAGACTGCGTGAAGAGGAAAGAACAAAACGAGAGGAAAAACGTGAAATTGAACGAAGGGAAAAGTATTTGCTGAGAGAAAATTTAAAAGCCGAGAGAATGAGGCAAAAAGAAGAGCTTCGGAAAGAGAAAGAGGCAGAGAGAAGAAAAGCTGCCCTTGAGAAGGCACATGCCCGTAAAATAGCTAAGGAATCCATGGAACTTATTGAGGATGAACAGCTGGAAATGATGGAGTTAGCTGCTTCAAGCAAAGGGCTTTCCTCTATTATCCGTCTTGATTTTGATACTTTGCAAAACATTGAATCATTTAGGGGTTCACTGTGCGTTTTCCCACCCGAGAATGTAAAGCTAAGAAAACCATTTGCTATCCAACCATGGATCAACTCAGAAGAGAATATTGGCAACCTTCTCATGGTTTGGAGGTTTTTGATTACCTTTGCTGATGTTCTGGAATTATGGCCTTTTACACTTGATGAGTTCGTGCAAGCATTTCACGATTATGATTCAAGATTGTTAGGTGAGATACATGTTGCTATCCTTAAGGTGATAATAAAAGACATTGAAGATGTTGCAAGGACACCTGTTACAGGATTAGGAATGAATCAGAATGGTGCTGCAAATTCTGGAGGTGGCCATCCAGAGATTGTGGAAGGGGCATATGCATGGGGCTTTGACATACGGAATTGGCATAAGCACTTGAATCAATTGACATGGCCAGAAATTTTCCGACAGCTAGCATTGTCTGCAGGATATGGACCACAGTTCAAGAAAAGAAGTATTACAAGTTCACGTGCAAATAGTAAAGATGAGGGAAGAAGTTGTATAGATACCATTTCTGCGCTTCGTAATGGTTCAGCAGCTGAAAATGCGGTGGCAAAAATGCAGGAGAGAGGTCTATTAGGACCTCGAAGATCTAGGCATCGGTTAACTCCTGGAACAGTTAAGTTTGCAGCATTTCATGTTCTCTCGCTAGAGAGTGGTGATGGATTGAATGTAATAGAGCTTGCCGAAAAAATTCAGAAATCTGGTCTTCGGGACCTGACAACCAGCAAGACACCCGAGGCATCAATTTCTGTTGCTTTGACAAGAGATGCCAAGCTTTTTGAAAGAGTAGCCCCATCAACTTATTGTGTACGTGCTGCATTTAGAAAGGATCCTGCTGATGCTGAGTCCATTCTTTCCGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCTAGCTGAGGAAGATGCTGATGATGGTGAAAGAGAAGAGTCAGAAAGTGAAGTCGATGAGGATCCTGAAGTTGATGATTTGGTTAATCCTTCAAGTGTTATCAAAACATCTGATCATTGTAATGATTTTTCATCAAGTGGAAAAGAAAATCTAGGTCATGATGCAGAACTTAAAGATGAGTTCGATAAGGATCTGCCTTATCCTGACAATGGTTCTAAGAGTGCTGATCGTCCACGTGCTGTTTCTGGACAACCTGTTGCTTGTGAAAATCTAAATGCCAGAAATCTAGGTGAAGATAACATGGAAATTGATGAAAGTAAGTCTGGAGAGTCATGGATTCAAGGGCTTACTGAAGGAGAGTATTCTGATCTCAGTGTAGAGGAGCGATTAAATGCTCTTGTTGTATTGGTTGGTGTGGCAAATGAAGGAAATTCAATCCGTGTTGTTCTTGAGGATCGTTTGGAAGCAGCAAATGCTCTGAAGAAGCAAATGTTGGCAGAAGGACAGATAGATAAAATTCGCCTGAAAGATGATAATGTCATTAAATCAGATTTTCCAAAGGTTGAAACACAGCTTACATGTGCTGCTGTGGAGGGTAACCAAAGTCCATTGCTTGATATTAATAATAATGAGGAATCTCCCAGCAAAACAGAAAATAAAAGACTAGCTCTTGTTGGACAAAACCTGCCTGAAAAGCTCTCATCAAGTCAAGATCTCTGCATAGGTCCTGACAATCCTCAGACCGTGTTATCTGCGCAATATTCAAAACGGTCACGATCTCAATTGAAATCTTATATTTCCCAGCTAGCAGAGGAGATGTACATCTATAGATCCTTACCCCTTGGGCAAGACCGCAGACATAATCGATATTGGCAATTTGTTGCATCTGCTTCTTGCAATGATCCTGGCTCGGGAAGGATCTTTGTTGAATATCATGATGGCAAATGGAGGCTTATTGATTCTGTAGAGGCCTTTGACACCCTTCTGAGCTCACTGGATTCACGTGGCATCAGGGAATCACATTTGCGTCTAATGTTGCTAAAGATTGAGAATATATTTAAGGAAAATGTTCAAAAGAATGCAAAATGTGCCAAAATCGGAAACACAGATGAAATCCATGTTAAAAATGAAGCTGATGAAACAGATTCCAGTCCTGACAACCATACTAGATCTGACAGTCCTAGTAGTACTCTTTGTGGATTGAGCTCTGATACTTCAGAAACTTCGTCATCCTTCAGAATTGAGCTTGGGAAAAGTGAGAGCGACAAGAAATCTGCCTTGGGAAGGTATCAAGATTTTCAAAAATGGATGTGGAAAGAATGTTATAACCCATCGATATTATCTGCAATGAAATATGGGAAAAAGAGATGCAAACCTCAGGTTGACATATGTGATACCTGTCTTGACCTTTATTGCTTGGAAGATTCCCATTGCAGTTATTGCCACCGCACTTTTCCATCAAATGATGGATTTAATTTTTCCAGACATGCTTTTGAATGTGGAGACAAGTTACCTAAAGATATTTGTATTTTGGATTCTTCTCTTCCTTTGCGGACAAGACTGCTTAAGGCAATACTGGCTTTTATTGAGGTATCTGTTCCACCTGAAGCATTTCAATCAATTTGGACAGAAGATATTAGGAGGCTTTGGGGTGTGAAGTTGAACAGATCTTCTTCTGTTGAGGAACTTCTACAGATATTGACTCTATTTGAGAGAGCACTAAAGCGAGATTTTTTATCATCATCATTCTCTACCACTGGGGATTTGTTGGGGATGAGCACTCTGTTGGAGAGTGCTGCACATACTTCCATGGATCTTGAATCAGTTCCTGTACTTCCATGGGTTCCGCGGACCACTTCAGCTGTGTCTCTCAGACTTTTTGAGTTTGACACATCCATCGCTTACGTTAAGCTAGAGAAACCTGAGCTGTATGAGGAGAAAGAAGCTAGATACATACTTCCTTCAAGATATGCCTCTGTCAAATCTACTAAAGTGGTTGAGCCAGCAGACTTGGAGCGTGATGAATTAATGAAAGTGAAATCTGCCCCTATTGGGCGCAGCAGCAAAAAAAGGGGACGAGTGAATCATGATAAAGGAAGGACTAAAAAGCTGTCTAAAAGAACGAATGATTCCAAACAAGATAATGTCCACCACAATTTTATTGTCACTGATAATCTAAGTCAAAGAATAAAACAGCAGGGACAAGGATCACAAGGACAAGCAGGTGGACGTGGCCCTCGGACAGTTAGGAAAAGGAGAGCAGAGAAGAGGGTTGTTGAAGATTATTTGTTGGATGATAGGGCTGCCAATCATAGCTTCAATATTGGTAGAGAACCATCTAGAATCTTGGATGAGGACTGGAATTATGAGAAGACAGGTCCCATCCATATGGAAGCTGCTGACGTGAGTAGCAGCAGTGAAGAGGTTGAATATGATGACAACGCCCAGGCAGTGGAATCTGATGACAATGTCGAAGCAGTAGAGTACGGTCAAGGAAACTGGGAGATAGGTTTTAATGGTACCCCCAACAGATGGAATAGGGATTTGGTTGGAATGAGCGATGAAGATGCGGAAGCTTCTGAAGATGACAATAACAATGGCATTGAAGATAATGAAGTGGAAGAGGAAGAGGAAGTGGAAGAGGAGGAGGGTTCTGAGGCAGATGTTATGAGCGAGGGTTCAGATGGTATGGCCAATAATAGAGTTGTAAATGAAGAAAGCTCAGACTCAAGCGACTCTGAAGAGTCTTCTGAGTAG 5253 0.4253 MEGEASSEGDSDRKRGGGGGGDDNSDENNNNKNNNDGSNSKIAVSNEGQSKPKRQMKTPFQLETLEKAYALDNYPSEPVRIELSEKLGLTDRQLQMWFCHRRLKDKKESAPKKAPPPRKTVVEPLPDSPVDDLRMGSEHGNGYGSGSGSGSSPSTRLEGRNAMPLSVGYYESPQVEMELRAIACVEDQLGEPLREDGPILGVEFDPLPPDAFGAHIEHQKRPRLTYDGKMYGRHDVRTNKAMSRTSHEYQYLPNQSGNKSDAFGQFGQSHLHTPKEGPSRNSPLPRIHATKGHSSRVSLLSQQDKKGSPYLSPPLDDDVAPTQEVYTNMANVGMNSHQTDCQTGGSENPYASPSGQILQNNATHNERKRKGDDGKITRDVEANEMRIQKDLEKQDNLRRKNEERIRKEMERQDRERKKEEERLMRERLREEERTKREEKREIERREKYLLRENLKAERMRQKEELRKEKEAERRKAALEKAHARKIAKESMELIEDEQLEMMELAASSKGLSSIIRLDFDTLQNIESFRGSLCVFPPENVKLRKPFAIQPWINSEENIGNLLMVWRFLITFADVLELWPFTLDEFVQAFHDYDSRLLGEIHVAILKVIIKDIEDVARTPVTGLGMNQNGAANSGGGHPEIVEGAYAWGFDIRNWHKHLNQLTWPEIFRQLALSAGYGPQFKKRSITSSRANSKDEGRSCIDTISALRNGSAAENAVAKMQERGLLGPRRSRHRLTPGTVKFAAFHVLSLESGDGLNVIELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERVAPSTYCVRAAFRKDPADAESILSEARKKIQIFENGFLAEEDADDGEREESESEVDEDPEVDDLVNPSSVIKTSDHCNDFSSSGKENLGHDAELKDEFDKDLPYPDNGSKSADRPRAVSGQPVACENLNARNLGEDNMEIDESKSGESWIQGLTEGEYSDLSVEERLNALVVLVGVANEGNSIRVVLEDRLEAANALKKQMLAEGQIDKIRLKDDNVIKSDFPKVETQLTCAAVEGNQSPLLDINNNEESPSKTENKRLALVGQNLPEKLSSSQDLCIGPDNPQTVLSAQYSKRSRSQLKSYISQLAEEMYIYRSLPLGQDRRHNRYWQFVASASCNDPGSGRIFVEYHDGKWRLIDSVEAFDTLLSSLDSRGIRESHLRLMLLKIENIFKENVQKNAKCAKIGNTDEIHVKNEADETDSSPDNHTRSDSPSSTLCGLSSDTSETSSSFRIELGKSESDKKSALGRYQDFQKWMWKECYNPSILSAMKYGKKRCKPQVDICDTCLDLYCLEDSHCSYCHRTFPSNDGFNFSRHAFECGDKLPKDICILDSSLPLRTRLLKAILAFIEVSVPPEAFQSIWTEDIRRLWGVKLNRSSSVEELLQILTLFERALKRDFLSSSFSTTGDLLGMSTLLESAAHTSMDLESVPVLPWVPRTTSAVSLRLFEFDTSIAYVKLEKPELYEEKEARYILPSRYASVKSTKVVEPADLERDELMKVKSAPIGRSSKKRGRVNHDKGRTKKLSKRTNDSKQDNVHHNFIVTDNLSQRIKQQGQGSQGQAGGRGPRTVRKRRAEKRVVEDYLLDDRAANHSFNIGREPSRILDEDWNYEKTGPIHMEAADVSSSSEEVEYDDNAQAVESDDNVEAVEYGQGNWEIGFNGTPNRWNRDLVGMSDEDAEASEDDNNNGIEDNEVEEEEEVEEEEGSEADVMSEGSDGMANNRVVNEESSDSSDSEESSE* 1751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1974 1750 SUPERFAMILY Homeodomain-like 39 108 IPR009057 -
Tpr3g1974 1750 MobiDBLite consensus disorder prediction 363 395 - -
Tpr3g1974 1750 Coils Coil 400 448 - -
Tpr3g1974 1750 Coils Coil 979 999 - -
Tpr3g1974 1750 MobiDBLite consensus disorder prediction 1687 1721 - -
Tpr3g1974 1750 PANTHER HOMEOBOX DOMAIN PROTEIN 18 1750 - -
Tpr3g1974 1750 Pfam DDT domain 556 611 IPR018501 -
Tpr3g1974 1750 MobiDBLite consensus disorder prediction 23 57 - -
Tpr3g1974 1750 Gene3D - 33 112 - -
Tpr3g1974 1750 SMART HOX_1 50 112 IPR001356 GO:0003677
Tpr3g1974 1750 MobiDBLite consensus disorder prediction 1561 1586 - -
Tpr3g1974 1750 MobiDBLite consensus disorder prediction 1672 1750 - -
Tpr3g1974 1750 MobiDBLite consensus disorder prediction 1 21 - -
Tpr3g1974 1750 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1109 1181 IPR028941 -
Tpr3g1974 1750 MobiDBLite consensus disorder prediction 1509 1547 - -
Tpr3g1974 1750 Coils Coil 451 488 - -
Tpr3g1974 1750 MobiDBLite consensus disorder prediction 1 61 - -
Tpr3g1974 1750 ProSiteProfiles 'Homeobox' domain profile. 48 108 IPR001356 GO:0003677
Tpr3g1974 1750 MobiDBLite consensus disorder prediction 294 308 - -
Tpr3g1974 1750 SMART testlast3 555 614 IPR018501 -
Tpr3g1974 1750 MobiDBLite consensus disorder prediction 1207 1246 - -
Tpr3g1974 1750 MobiDBLite consensus disorder prediction 104 130 - -
Tpr3g1974 1750 ProSiteProfiles DDT domain profile. 555 614 IPR018501 -
Tpr3g1974 1750 ProSiteProfiles HARE-type HTH domain profile. 737 806 IPR007759 GO:0006355
Tpr3g1974 1750 MobiDBLite consensus disorder prediction 833 865 - -
Tpr3g1974 1750 Pfam Homeodomain 51 107 IPR001356 GO:0003677
Tpr3g1974 1750 MobiDBLite consensus disorder prediction 833 858 - -
Tpr3g1974 1750 Pfam HB1, ASXL, restriction endonuclease HTH domain 737 805 IPR007759 GO:0006355
Tpr3g1974 1750 MobiDBLite consensus disorder prediction 1220 1246 - -
Tpr3g1974 1750 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 18 1750 IPR044977 GO:0006357
Tpr3g1974 1750 CDD homeodomain 53 109 IPR001356 GO:0003677
Tpr3g1974 1750 MobiDBLite consensus disorder prediction 290 317 - -
Tpr3g1974 1750 MobiDBLite consensus disorder prediction 1516 1534 - -
Tpr3g1974 1750 MobiDBLite consensus disorder prediction 361 395 - -
Tpr3g1974 1750 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 940 983 IPR028942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1974 Tpr-Chr3 17851627 17861896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1974 45 1675 Homeobox Transcription Factor Family AT1G28420 48.563 0.0 1305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Tpr3g1974 WSD 3.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1974 - - gmx:100818817 2232.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1974 3 17851627 17861896 Tpr3g1974 3 17851627 17861896 ECH
Tpr3g1974 3 17851627 17861896 Tpr7g3028 7 37488686 37498012 PCT