Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1969 ATGAATAATTTGCTCTCGCCATCAACCCTGCCATTTACCATATGCGCCACGTTGTTGTTTCTCTTCATTCTTTATTGGCTACGCAGAAGCAACAACAGTAGTAATACTGGTGTAGCTTCAAAGACACTCCCACCACCACCGGAAGTCGGCGGTGCTTTGCCTTTAATCGGCCACCTCCACCTTTTAAGCGGTTCCCAATCACCTCACGTCGTCTTGGGGAAGTTAGCTGACAAATATGGACCAATCTTTACCTTCCGTTTGGGTGTTCATCGAACTTTGGTTATAAGTAATTACGAAATGGCAAAACAGTGTTTCACCATAAACGACAAAGCATTTGCTTCACGTCCTAAATCCGTAGCCTTTGAAATTCTAGGCTATAACTTTTCCATGTTTGGTTTTAGTCCCTACGGTTCTTATTGGCGCACCATGAGAAAGATCGCCACCGTCCACGTCCTCTCCACTCAACGAATAGAGATAATGCTCAAACACGTGATGGAGTCTGAGGTGGAAACAACAATGAAAGGTAGTTACGATTTTTGGCAGAAGATGAAGAACGTGGGTAATCCTGAAAAGACAATTACTGAAATGAAAAAATGGTTCGGGGATATAGCTATAAATGTTATGTTTAGAACGGTTTTAGGAAAACGTTTTGACGGTGATGATGAAGAGAATCAACGGATTAGAAAAGCACTTAGGGACTTGTTCGATCTCACCGGTTCATTTGTTATATGTGACACGTTGCCGTATTTGAGATGGTTGGATTTGGATGGAAAAGAGAAAGAGATGAAGAAAACGGCCAAAGAGTTGGATGAATTTGTTAGTGTTTTGCTCGATCAACACAAACGTAATAGGAACTCTGGCGGTGAACTTGACTTCATGGATATACTCATTTCCACCGTTGATGATCATGATTTGGACGGTCGTGATTCCGACACCGCAATCAAAGCCACTTGTCTAGCACTTATTCTAGCAGGCACAGATACTACAGCAGGAACATTGACTTGGGCTCTCTCTTTACTTCTCAACAATCGTGAAGTCCTAAACAAGGCCATTCAAGAATTAGATACACGAATTGGTATGGAAAATATGGCAATAAAAACAGATTTGACAAAATTGAAGTATATTGAAGCCATTATCAAGGAAACATTGCGTTTGTACCCAGCCGCACCACTCAATATTCCTCATGAGTCCATTGAAGATTGTACTGTTGGTGGATACCATGTGCCTTCCGGGACGCGTCTTTTAACCAATGTTTCGAAACTTCAACGAGATCCAATATTATATATAGATCCGTTGGAGTTTCGACCAGAGAGATTTCTCACAACTCACAAGGATGTTGATGTCAAAGGTCAACATTTTGAATTGATTCCATTTGGTTCGGGTAGAAGAATGTGCCCAGGAGTCTCATTTGGTCTTCAACTTATGCAAATAACACTCGCTACTTTGTTGCATGGGTTTGATATAGTGACTCTAAATGAAGGACCAGTTGATATGGCTGAACAGAACGGCCTCACTACTATCAAAGCCTCTCCACTTGAAGTCATTCTCACTCCACGTTTGTCTACCCAAGTTTTTAGTCAAAATCTATGA 1590 0.4145 MNNLLSPSTLPFTICATLLFLFILYWLRRSNNSSNTGVASKTLPPPPEVGGALPLIGHLHLLSGSQSPHVVLGKLADKYGPIFTFRLGVHRTLVISNYEMAKQCFTINDKAFASRPKSVAFEILGYNFSMFGFSPYGSYWRTMRKIATVHVLSTQRIEIMLKHVMESEVETTMKGSYDFWQKMKNVGNPEKTITEMKKWFGDIAINVMFRTVLGKRFDGDDEENQRIRKALRDLFDLTGSFVICDTLPYLRWLDLDGKEKEMKKTAKELDEFVSVLLDQHKRNRNSGGELDFMDILISTVDDHDLDGRDSDTAIKATCLALILAGTDTTAGTLTWALSLLLNNREVLNKAIQELDTRIGMENMAIKTDLTKLKYIEAIIKETLRLYPAAPLNIPHESIEDCTVGGYHVPSGTRLLTNVSKLQRDPILYIDPLEFRPERFLTTHKDVDVKGQHFELIPFGSGRRMCPGVSFGLQLMQITLATLLHGFDIVTLNEGPVDMAEQNGLTTIKASPLEVILTPRLSTQVFSQNL* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1969 529 PANTHER CYTOCHROME P450 82C3-RELATED 46 525 - -
Tpr3g1969 529 Coils Coil 337 357 - -
Tpr3g1969 529 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1969 529 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1969 529 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1969 529 PANTHER CYTOCHROME P450 46 525 - -
Tpr3g1969 529 Pfam Cytochrome P450 47 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1969 529 SUPERFAMILY Cytochrome P450 49 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1969 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Tpr3g1969 529 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1969 529 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1969 529 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1969 529 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1969 529 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1969 529 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1969 529 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1969 529 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1969 529 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1969 529 Gene3D Cytochrome P450 33 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1969 Tpr-Chr3 17771921 17779550 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1969 47 525 Cytochrome P450 AT4G31940 48.687 3.52e-170 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1969 - - gmx:100778017 707.597