Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1968 ATGATGAATAATTTGTTCTTGCCATCAACCCTGCCATTTACCATATGCGCCACGTTATTGTTTCTCTTCCTTCTTTATAGGCTACGCAGAAGCAACAATAGTACTGGTGTAGCTTCAAAGACACTCCAACCACCACCAGAAGTTGGCGGAGCTTTGCCTTTAATCGGCCACCTCCACCTTTTAAGTGGTTCCCAGTCACCTCACGTCGTCTTGGGGAAGTTAGCCGACAAATACGGACCAATCTTCACCTTCCGTTTGGGTGTTCATCGAACTTTAGTTATAAGTAATTATGAAATGGCAAAACAGTGTTTTACAATAAACGACAAAGCATTTGCTTCACGTCCTAAATCTGTAGCCTTTGAAATTCTAGGCTATAACTTTTCCATGATTGGTTTCAGTCCCTACGGTTCCTATTGGCGCACCATGCGGAAAATCGCCACCGTCCACGTCCTCTCCACTCAACGGATAGAGATATTGCTTAAACACGTGATGGAATCTGAGGTGGAAACAGCAATGAAAGGTAGTTACGATCTTTGGCAAAAGATGAAGAACGTGGGTAATCCTGAAAGGGCGATTACGGAAATGAAAAAATGGTTTGGTGACATAGCTATAAATGTTATGTTTAGAACGGTTTTTGGAAAACGTTTTGGCAATGACAATGAAGAGAATGAACGGATTAGAAAAGCACTTAGGGATTTGTTCGATCTCACTGGTTCATTTGTTATATGTGACACGTTGCCGTATTTGAGATGGTTGGATTTGGATGGAAAAGAGAAGGCGATGAAGAAAACGGCCAAAGAGTTGGATGAATTTGTTTGTGTTTTGCTCGATCAACACAAACGTAATAGAAACTCTGATGACGAACTTGACTTCATGGATGTGCTCATTTCCACCGTTGATGATCATGATTTGGACGGCCGTGATTCTGACACCGCAATCAAAGCTACTTGTTTGACACTAATTCTAGCAGGCACAGACACAACATCAGGAACATTGACTTGGACTCTCTCTTTACTTCTCAACAACCGTGAAGTCTTAAATAAAGCTATTCAAGAATTAGATACACATATTGGTACGGAAAATATGACAATAAAAACATATTTGACAAAATTGAATTATATTCAAGCCATTATCAAGGAAACATTGCGTTTGTACCCAGCCGCACCACTCAATATTCCTCATGAGTCCATTGAAGATTGTACTGTTGGTGGATACCATGTGCCTTCCGGGACGCGTCTTTTAACCAATGTTTCGAAACTTCAACGAGATCCAATATTATATATAGATCCGTTGGAGTTTCGACCAGAGAGATTTCTCACAACTCACAAGGATGTTGATGTCAAAGGTCAACATTTTGAATTGATTCCATTTGGTTCGGGTAGAAGAATGTGTCCCGGAATCTCATTTGGTATTCAACTTATGCAAATAACACTCGCTACTTTGTTACATAGATTTGATATAATTACTCCAAATGAAGGACCAGTTGATATGGCTGAACAAAACGGCCTCACTACTATCAAAGCCTCTCCACTTGAAGTCATTCTCACTCCACGTTTGTCTACCCAAGGTTTTAGTCAAAATACATGA 1587 0.4033 MMNNLFLPSTLPFTICATLLFLFLLYRLRRSNNSTGVASKTLQPPPEVGGALPLIGHLHLLSGSQSPHVVLGKLADKYGPIFTFRLGVHRTLVISNYEMAKQCFTINDKAFASRPKSVAFEILGYNFSMIGFSPYGSYWRTMRKIATVHVLSTQRIEILLKHVMESEVETAMKGSYDLWQKMKNVGNPERAITEMKKWFGDIAINVMFRTVFGKRFGNDNEENERIRKALRDLFDLTGSFVICDTLPYLRWLDLDGKEKAMKKTAKELDEFVCVLLDQHKRNRNSDDELDFMDVLISTVDDHDLDGRDSDTAIKATCLTLILAGTDTTSGTLTWTLSLLLNNREVLNKAIQELDTHIGTENMTIKTYLTKLNYIQAIIKETLRLYPAAPLNIPHESIEDCTVGGYHVPSGTRLLTNVSKLQRDPILYIDPLEFRPERFLTTHKDVDVKGQHFELIPFGSGRRMCPGISFGIQLMQITLATLLHRFDIITPNEGPVDMAEQNGLTTIKASPLEVILTPRLSTQGFSQNT* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1968 528 Gene3D Cytochrome P450 32 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1968 528 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1968 528 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1968 528 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1968 528 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1968 528 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1968 528 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1968 528 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1968 528 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1968 528 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1968 528 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1968 528 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1968 528 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1968 528 SUPERFAMILY Cytochrome P450 50 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1968 528 Pfam Cytochrome P450 46 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1968 528 PANTHER CYTOCHROME P450 44 522 - -
Tpr3g1968 528 PANTHER CYTOCHROME P450 82C3-RELATED 44 522 - -
Tpr3g1968 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1968 Tpr-Chr3 17760196 17766504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1968 46 524 Cytochrome P450 AT4G31940 47.677 1.09e-164 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1968 - - gmx:100778017 688.337