LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr3g1951	ATGGATCCTAATCATTTTCATTATCAACAAGCTATGTTCAATTTCATGCAAAATTATCAAAATCCTAATCCTCAAAATTCTCAAATTCCACCGATGCCACCATTTTCTACTCAAGTTCCACCATTTTCTACTCAAGTTGGTACTGAAAAAGAAGAAAGGGTTGTTGTTAAAAAAAAATCTCGAGAGCAATTTGCAAGGGATGAGGATATACTACTTATCCAATCATGGCTCAATGTTTCAAAGGATCCAATTGTGGGAGTTGATCAAAAGGCTGAGAGTTTTTGGGTAAGAGTCGCTGCCAATTATAACCAGTATCGTGGGGAATCGCGGGAAAAGTTAAAGGGACAATTAAAATGTCGATGGCATCGAATAAATGGCTTGGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTAATGGAAAGAAAAGTGGGACATCGGAGAACGATGTCATGGCCGCTGCAAATGCATTTTTTGCTCAGGATCAAGGTACAACATTCAACCTTGAGTACGCATGGAGATTGTTAAAAGATGAACCTAAATGGATGGGAGAATCGATTGAAAGTTCTTCAAAAATAACAAAGACTTATGCTAGTGAGGCATCATCGGAGAACCCAAATACACCTTCAAGTTATGAGTTTAACTCATCATCACCAATGGAGCGTCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGGCAAAGGAAATTCCAAATGAAACGCAAGATGCAAGGAATAAAAGAGCAATGTTAATGGAAAGACTAGCGCAAAGTAAGGAAGACGAGATAGAATTAAAGGTAGTGCAACTAATGATGAAAGACACTTCTACTATGAGCGATAGTCAACGAGATATTCATGAAAAATATTGTAATAAGATGAAAAAAAAATATGGAATGTAG	903	0.371	MDPNHFHYQQAMFNFMQNYQNPNPQNSQIPPMPPFSTQVPPFSTQVGTEKEERVVVKKKSREQFARDEDILLIQSWLNVSKDPIVGVDQKAESFWVRVAANYNQYRGESREKLKGQLKCRWHRINGLVQKFVGCYKQAVNGKKSGTSENDVMAAANAFFAQDQGTTFNLEYAWRLLKDEPKWMGESIESSSKITKTYASEASSENPNTPSSYEFNSSSPMERPMGQKAAKRKGKAKEIPNETQDARNKRAMLMERLAQSKEDEIELKVVQLMMKDTSTMSDSQRDIHEKYCNKMKKKYGM*	301

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr3g1951	300	Coils	Coil	242	262	-	-
	Tpr3g1951	300	PANTHER	-	26	297	-	-
	Tpr3g1951	300	MobiDBLite	consensus disorder prediction	225	247	-	-
	Tpr3g1951	300	MobiDBLite	consensus disorder prediction	197	247	-	-
	Tpr3g1951	300	PANTHER	OS07G0575233 PROTEIN	26	297	-	-
	Tpr3g1951	300	MobiDBLite	consensus disorder prediction	197	222	-	-
	Tpr3g1951	300	Pfam	No apical meristem-associated C-terminal domain	166	285	IPR029466	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr3g1951	Tpr-Chr3	17581430	17582711	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr3g1951	3	260	Glutathione S-transferase Gene Family	AT5G41240	30.657	4.05e-26	106

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr3g1951	-		-	cam:101493921	338.576