Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1903 ATGGAGCTAAACTTTGGCACTAATTCTTTAGACAACTTTTGTTCTGATCAAGATGGCTTATCCCTTAAGCCATTAAGGTGCCCTGCACCTTTTCTTTTGAAGACCTATGATTTGTTGGAAGAAGGTAGTGAAGAAAAAGATGGAATTAAAATAGTGTCATGGAATGAAGAAGGAAATGGTTTTGTTGTGTGGTCTCCAGCTGAATTTTCAGAGCTTATCTTGCCTAGATATTTCAAGCACAATAACTTCTCTAGCTTTATTCGACAATTGAATACATATGGATTTAAGAAAACATCATCTAAAATATGGGAATTCAAGCATGAGAAATTTCAAAAGGGTTGTAGGCACATGCTTGTTGAAATCAATAGGAAAAAGTGTGAGCCAAGTGTGTTTCCTCAATACCTCAAGTCTTGTTCAGAGGAAAATGCAATGACTAGTTCATCAGTGGAAGAAAGCATTAACAATCATGAAATACTCATGGAAGAGAACAAGAACCTAAAGAAAGAGAGATTAGAGTTGCAAATGCAAATAGCTGAATGCAAGGCACTTGAAATGAAGTTGTTGGATTGTCTCTCTCAATATATGGATACCAGCCAAAATAAAGTCAGGAGACTATGA 618 0.3592 MELNFGTNSLDNFCSDQDGLSLKPLRCPAPFLLKTYDLLEEGSEEKDGIKIVSWNEEGNGFVVWSPAEFSELILPRYFKHNNFSSFIRQLNTYGFKKTSSKIWEFKHEKFQKGCRHMLVEINRKKCEPSVFPQYLKSCSEENAMTSSSVEESINNHEILMEENKNLKKERLELQMQIAECKALEMKLLDCLSQYMDTSQNKVRRL* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1903 205 Coils Coil 149 186 - -
Tpr3g1903 205 SMART hsfneu3 27 124 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr3g1903 205 PRINTS Heat shock factor (HSF) domain signature 73 85 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr3g1903 205 PRINTS Heat shock factor (HSF) domain signature 86 98 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr3g1903 205 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-2A-LIKE 24 204 - -
Tpr3g1903 205 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 24 204 IPR027725 -
Tpr3g1903 205 Pfam HSF-type DNA-binding 31 124 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr3g1903 205 Gene3D - 25 125 IPR036388 -
Tpr3g1903 205 SUPERFAMILY "Winged helix" DNA-binding domain 28 124 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1903 Tpr-Chr3 17191689 17194391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1903 27 205 HSF AT4G36990 37.624 5.53e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Tpr3g1903 HSF_DNA-bind 6.3e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1903 K09419 - gmx:100783723 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1903 3 17191689 17194391 Tpr3g1903 3 17191689 17194391 ECH