Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1893 ATGGAAACACAACACAAACAATGGGACGAACGAACAAGTCTTTATGATGACCCCACCATACTTACTAGCTACCAAAAATCTACAAGACCAACACAACACAACACAACACAACACAACACAACATTTTCTCATTCAACTCTTTACATTTCACCACAAACTAACTATTTCCTTCATTGGAGGACTTCGATCTGCATTTTTTTTTCTCCTGGCTTGTCAAGGCATCACAGATTTGCAGTCACATTCCAGGACATTATGAGTTGTGGCTGCTTTAGAGCCTCAACTCTCAAAAGGAGTCAACCTCATATTCCTCATGAAATTGATGGGTATCCACTTGAAAATGTTGTGCATTTTTCTGAAAAGGACTTGAGATTGGCCACTGATAATTATCATCCAAGCAAAAAGATAGGACGGGGAGGTTTTGGCACAGTTTACCAGGGAACCTTAAAAGATGGAAGACAAGTAGCAGTGAAGAGCCTTTCAGCTGCATCAAAGCAGGGAGTTCGTGAATTTTTAACTGAAATTAAAACTATATCGCTTGTCAAGCATCCAAACCTTGTTGAATTGATCGGTTGCTGCGTTCAAGAACCTAATCGTACATTAGTTTATGAATTTGTGGAAAATAACAACCTTGATCGAGCACTGCTAGGAAATAGAAGCACCAACATTAAGCTAGGTTGGGAAAAAAGATCTAATATCTGCACTGGTACGGCTAGAGGTCTTGCTTTTCTTCACGGAGAAGCTGTTCCACACATTGTGCATAGAGACATCAAAGCTAGCAACATATTACTTGACAGAGACTTTAATCCAAAAATAGGAGATTTTGGCCTGGCTAAGTTATTTCCAGAAGACATCACTCATATTAGCACAAGAATTGCTGGAACAACCGGTTACTTAGCACCCGAATATGCAATGGGCGGCCAGTTAACCATGAAGGCTGATGTATATAGTTTTGGAGTTCTTATACTTGAAGTAATTAGTGGCCAAAGCAGTGCGAGGACAAACTGGGGAGGATCAGACAAATTTCTCTTGGAATGGGCCTGGCAACTTCATGAAGAGGGTAAACTGTTGGAGCTCGTGGATCCAGAAATGGTTGAATATCCTAAGGAAGAGGTGATTAGGTACATGAAAGTAGCTTTTTTCTGCACACAAGCAGCAGCAAGCAGAAGGCCATCGATGTCGCAAGTTGTTGATATGCTCTCCAAGACAATTAGACTGAATGAAAAGCAACTAACAGCACCAGGGTTCTTCCAGACTTCAGAAGAATCCTCTCTAAAGAAGTCATCCATCGAGTCCACGAGCTATCAGTTTAGTTCTGCCCCTGCCAGTATTACTCAGATCACCCCACGGTGA 1350 0.4148 METQHKQWDERTSLYDDPTILTSYQKSTRPTQHNTTQHNTTFSHSTLYISPQTNYFLHWRTSICIFFSPGLSRHHRFAVTFQDIMSCGCFRASTLKRSQPHIPHEIDGYPLENVVHFSEKDLRLATDNYHPSKKIGRGGFGTVYQGTLKDGRQVAVKSLSAASKQGVREFLTEIKTISLVKHPNLVELIGCCVQEPNRTLVYEFVENNNLDRALLGNRSTNIKLGWEKRSNICTGTARGLAFLHGEAVPHIVHRDIKASNILLDRDFNPKIGDFGLAKLFPEDITHISTRIAGTTGYLAPEYAMGGQLTMKADVYSFGVLILEVISGQSSARTNWGGSDKFLLEWAWQLHEEGKLLELVDPEMVEYPKEEVIRYMKVAFFCTQAAASRRPSMSQVVDMLSKTIRLNEKQLTAPGFFQTSEESSLKKSSIESTSYQFSSAPASITQITPR* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1893 449 PANTHER - 80 442 - -
Tpr3g1893 449 Gene3D Transferase(Phosphotransferase) domain 1 205 418 - -
Tpr3g1893 449 Pfam Protein tyrosine and serine/threonine kinase 132 399 IPR001245 GO:0004672|GO:0006468
Tpr3g1893 449 CDD STKc_IRAK 135 401 - -
Tpr3g1893 449 SUPERFAMILY Protein kinase-like (PK-like) 113 434 IPR011009 -
Tpr3g1893 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Tpr3g1893 449 ProSiteProfiles Protein kinase domain profile. 129 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1893 449 SMART serkin_6 129 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1893 449 ProSitePatterns Protein kinases ATP-binding region signature. 135 157 IPR017441 GO:0005524
Tpr3g1893 449 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 80 442 - -
Tpr3g1893 449 Gene3D Phosphorylase Kinase; domain 1 103 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1893 Tpr-Chr3 17103762 17110089 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1893 96 415 Receptor kinase-like Gene Family AT1G07650 52.160 1.63e-103 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g1893 PK_Tyr_Ser-Thr 3.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1893 - - gmx:100775344 619.387