Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1888 ATGTCAACCTTTCTGCTAAGTTATATTTCACAGAAAAACTTCTATTCATTCCCTATGCTTTTCTTCACTATCTTTCCACTATTCCTTTCACTTTTCTTCATCATCAAATGGTATTTCAACAATTCTGTCACCACAAGAAACTCCCCACCTTCACCTCCAAGATTACCTCTACTTGGTAATCTGCATCAAATTGGCTTATTCCCTCACCGATCACTCCAAACTTTAGCTCACAAATATGGCCCTTTAATGCTTCTTTATCTTGGGAAGGTACCAGTGATTATAGTTTCTTCTGCTGATGCAGCAAGTAAGGTAATGAAAACTCATGACTTGGTTTTCTCTGATAGGCCACAACGTAAAATCTTTGATATCATGTTGTATGGTTCGAAAGATGTGGCAAGTTGTGCATATGGTGAGTATTGGAGACAAGTAAGGAGTCTCAGTGTGTTACATCTTCTGAGTAACAAAAGAGTTCAATCTTATCGTCGTGTAAGAGAAGAAGAAACTGCAAAAATGATGCAAAGTATTCAATAG 531 0.3729 MSTFLLSYISQKNFYSFPMLFFTIFPLFLSLFFIIKWYFNNSVTTRNSPPSPPRLPLLGNLHQIGLFPHRSLQTLAHKYGPLMLLYLGKVPVIIVSSADAASKVMKTHDLVFSDRPQRKIFDIMLYGSKDVASCAYGEYWRQVRSLSVLHLLSNKRVQSYRRVREEETAKMMQSIQ* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1888 176 PANTHER CYTOCHROME P450 71B11-RELATED 22 176 - -
Tpr3g1888 176 Pfam Cytochrome P450 49 176 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1888 176 SUPERFAMILY Cytochrome P450 49 175 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1888 176 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1888 176 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1888 176 Gene3D Cytochrome P450 42 176 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1888 176 PANTHER CYTOCHROME P450 FAMILY PROTEIN 22 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1888 Tpr-Chr3 17060625 17061155 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1888 16 176 Cytochrome P450 AT3G48320 52.795 5.81e-56 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1888 - - gmx:100819183 231.491