Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1887 ATGTTGGAGTTTGGAGAGTTATTAGGTACTTTCTTTATAGGAGATTATATACCTTGGCTTAATTGGTTGGGAAAGGTTAATGGTTTTTATAGCAAGGCAGAAAAAGTGGCTAAACATTTGGATGAATTTTTTGAGGAAGTAATTGAGCAGCACATTAGTGGTAAAAGATCTGATGGACATGTTGGTGAGGAAAGCAATGATTTTGTGGATATTTTGCTTTCAGTTCAAAAGAGTAATGCTGCTGGCTTCTCAATTGATAGAACTGCAATTAAGGGTTTGTTACTGGACATGTTTGCTGCTGGAACTGATACCACATACACAGTCCTAGAATGGGCAATGACAGAACTATTAAGACACCAAACTGTGATGCATAAATTGCAAGATGAGGTCAGAATTGTGGTTGGCAACAAAACTCATGTAACTGAAGAGGATTTGGTTAACATGAATTACTTGAAAGCTGTGATCAAAGAAACTCTTCGCCTACATGTCCCGATTCCGTTACTAGTCCCTCGGAAATCAATGGAAGACGTCAAACTAAATGGCTATGACATTGCAGCTGGAACACAGGTAATAGTGAATGCTTGGGCAATTGCAAGAGACCCTTCAAGTTGGGAAGAACCTCTAGAGTTTAAACCAGAAAGGTTTATGAACAGTTCAATAGATTTTAAAGGACTGGACTTTGAACTTATCCCATTTGGAGCAGGAAGGAGGGGTTGTCCTGGAGTGTTATTTGCCACTGCTGTAAATGAATTGGTGCTAGCAAACCTTGTTTACCAATTTGATTGGAAATTGCCTGATGGAGTAGCAGGGGAGAATTTGGACATGTCTGAAGTTGTTAGCTTTACTTGTCATAGAAAATACCCCCTCCTTGCAATAGCTACCAAATATGAGAAAAAATGA 900 0.39 MLEFGELLGTFFIGDYIPWLNWLGKVNGFYSKAEKVAKHLDEFFEEVIEQHISGKRSDGHVGEESNDFVDILLSVQKSNAAGFSIDRTAIKGLLLDMFAAGTDTTYTVLEWAMTELLRHQTVMHKLQDEVRIVVGNKTHVTEEDLVNMNYLKAVIKETLRLHVPIPLLVPRKSMEDVKLNGYDIAAGTQVIVNAWAIARDPSSWEEPLEFKPERFMNSSIDFKGLDFELIPFGAGRRGCPGVLFATAVNELVLANLVYQFDWKLPDGVAGENLDMSEVVSFTCHRKYPLLAIATKYEKK* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1887 299 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 232 241 IPR017972 GO:0005506|GO:0016705
Tpr3g1887 299 Gene3D Cytochrome P450 1 296 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1887 299 Pfam Cytochrome P450 14 280 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1887 299 PRINTS P450 superfamily signature 100 117 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1887 299 PRINTS P450 superfamily signature 153 164 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1887 299 PRINTS P450 superfamily signature 230 239 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1887 299 PANTHER CYTOCHROME P450 71B11-RELATED 1 297 - -
Tpr3g1887 299 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 297 - -
Tpr3g1887 299 PRINTS E-class P450 group I signature 89 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1887 299 PRINTS E-class P450 group I signature 109 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1887 299 PRINTS E-class P450 group I signature 152 170 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1887 299 PRINTS E-class P450 group I signature 193 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1887 299 PRINTS E-class P450 group I signature 229 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1887 299 PRINTS E-class P450 group I signature 239 262 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1887 299 SUPERFAMILY Cytochrome P450 3 294 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1887 Tpr-Chr3 17058879 17060510 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1887 3 296 Cytochrome P450 AT3G48280 50.508 9.36e-110 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1887 - - gmx:100819183 435.261