Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1886 ATGAACATTTTCTTGGTACATTTTGTTGAATCTCTTATTCAAGAAGAGATTGAGAAATTGGTAGAGATTAAGTTTGTTCATTGTGAACCTGTTGAACTAAATTTTTGTAACTCATTTGATCTTTTAAAAACAATTTGGAATAGTGAATGGGAGAGCTGCTCTCTTCACCATATTCTTGTCTCCATCGATAACAAAAGGGTTCGATCTTATCGTCATGTGAGAGAGGAAGAAACTGCAAGAATGATGGAATATATTAAGAAGAGTTGTTCTTGTGCATCGCCGTTGAATTTAACTGAGTTGTGTTCTACAGTTACTAATGATATAATATGTAGGGTGGCTTTAGGAAAAATATACCGTGAAGGAATTAGAGGGATGAAATTTCAGGAGGTGTTGTTGGAGTTTGGAGAGTTATTGGGTACTGTATGTATTGGAGACTATATACCTTGGCTTGATTGGTTGGGGAAAGTTAATGGTTTGTATAGCAGGGCAGAAAAATGCGCCAAATATTTGGATGAGTTTATAGAACAAGTAATTGAAGAGCACATTAGTCATAGGTTGAGGAATGGTAATGTTGATAATGAGGAGCAGAGTGATTTTGTGGATGTTTTGCTTTCTGTTCAAAAGACTAATGCTAGTGGCTTTCCAATTGATAGAACTGCAATCAAGGCTTTGATACTGGACATGTTTGTTGGAGGTACTGACACTACTTACACAGTCCTAGAATGGGCGATGGCAGAACTGTTCAGACACGAAACTGTGATGCGTAAATTGCAAGATGAAGTGAGAACTGTGGTTGGCAACAGAACTCATGTAACTGAAGAGGATTTGGTTAACATGAACTACTTGAAAGCTGTGATTAAAGAAACCCTTCGCCTCCACGTACCGATAACGTTATTGGTCCCTCGGAAATCAATGGAAGATGTCAAACTAAATGGCTATGACATTGCAGCTGGAACACAAGTAATTATCAATGCATGGGCTATTGGAAGAGATCCTTCAAGTTGGGAAGAACCTTTAGAGTTTAAACCAGAAAGGTTTATGAATAGTTCAATAGATTACAAAGGATTGAATTTTGAACTTATCCCATTTGGATCAGGAAGAAGGGGTTGTCCTGGAGTGTTCTTTGCGATTGCTGTGAATGAATTGGTGCTAGCAAACCTTGTTTACCAATTTGATTGGAAATTGCCTGATGGAATAGCAGGGAAGGATTTGGATATGTCTGAGACTGTTGGACTAACCTGTCATAGAAAATACCCTCTCCTTGCTGTAGCTACCAAATATCTGAAAAATTAA 1293 0.3782 MNIFLVHFVESLIQEEIEKLVEIKFVHCEPVELNFCNSFDLLKTIWNSEWESCSLHHILVSIDNKRVRSYRHVREEETARMMEYIKKSCSCASPLNLTELCSTVTNDIICRVALGKIYREGIRGMKFQEVLLEFGELLGTVCIGDYIPWLDWLGKVNGLYSRAEKCAKYLDEFIEQVIEEHISHRLRNGNVDNEEQSDFVDVLLSVQKTNASGFPIDRTAIKALILDMFVGGTDTTYTVLEWAMAELFRHETVMRKLQDEVRTVVGNRTHVTEEDLVNMNYLKAVIKETLRLHVPITLLVPRKSMEDVKLNGYDIAAGTQVIINAWAIGRDPSSWEEPLEFKPERFMNSSIDYKGLNFELIPFGSGRRGCPGVFFAIAVNELVLANLVYQFDWKLPDGIAGKDLDMSETVGLTCHRKYPLLAVATKYLKN* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1886 430 Gene3D Cytochrome P450 13 425 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1886 430 PANTHER CYTOCHROME P450 FAMILY PROTEIN 52 426 - -
Tpr3g1886 430 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 363 372 IPR017972 GO:0005506|GO:0016705
Tpr3g1886 430 PRINTS P450 superfamily signature 231 248 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1886 430 PRINTS P450 superfamily signature 284 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1886 430 PRINTS P450 superfamily signature 361 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1886 430 PANTHER CYTOCHROME P450 71B11-RELATED 52 426 - -
Tpr3g1886 430 SUPERFAMILY Cytochrome P450 62 425 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1886 430 Pfam Cytochrome P450 68 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1886 430 PRINTS E-class P450 group I signature 104 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1886 430 PRINTS E-class P450 group I signature 220 237 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1886 430 PRINTS E-class P450 group I signature 240 266 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1886 430 PRINTS E-class P450 group I signature 283 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1886 430 PRINTS E-class P450 group I signature 324 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1886 430 PRINTS E-class P450 group I signature 360 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1886 430 PRINTS E-class P450 group I signature 370 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1886 Tpr-Chr3 17051743 17054009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1886 46 425 Cytochrome P450 AT3G48270 47.769 2.51e-127 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1886 - - gmx:100819183 518.079