Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1885 ATGTCCACCTTTCTTCAAACTTTTCTTTCACAAGAAAGCTTACATTCAATATTCCCTATGCTTTTCTTCACTATCTTCCCACTATTTCTTATTTCTCTTTTCTTCATCATCAAATATTGGTATGTCGACAATTCTTCTGTCACACAAAAAAACTCACTACCGTCACCTCCAAGATTACCTCTACTTGGTAATCTCCATCAACTTGGCTTATTGCCTCACCGGTCGCTCCAAAATTTATCACACAAATATGGCCCTTTAATGCTTCTTTATTTTGGGAAGGTTCCAGTACTTGTGGTTTCCTCTGCTGATGCAGCACGAAAAGTAATGAAAACTTATGATTTGGTTTTCTCTGATAGGCCACAAAGTAAAATCTTCGATATCCTTTTTTATGGTTTCAAAGATGTGGCAAGTTGTGGATATGGTGAGTATTGGAGACAAATAAAGAGTCTCTGTGTGTTACATCTTCTGAGTAACAAAAGGGTTCGATCTTATCATCGTGTAAGAGAGGAAGAAACTTTAAGAATGGTGGAATATATTAAGGAGCATTGTTGTTCTTCTGCTTTGCCGTTGAATTTAACGGAGTTGTGTTCTACAATTACTAATGATATAGTATGTAGGGTGGCTTTAGGAAAAAGATACCGTGAAGGAAGAGAGATGAAATTGCAGGAGGTGTTGTTGGAATTTGGAGAGTTATTGGGCACTGTATGTATAGGAGACTATATACCTTGGCTTGATTGGTTGGGAAAAGTTAATGGTTTTTATATCAGGGCAGAAAAATGTGCTAAATATTTGGATGAGTTTATAGAACAAGTAATTGAGGAGCACATTAGTCATAGGTTGAGGAATGGTACCGTTGATAATGAGGAGCAGGGTGATTTTGTCGATGTTTTGCTTTCTGTTCAGAAGACTAATGCTATTGGCTTCCCAATTGATAGAACTTCAATAAAAGCTTTGATACTAGACATGTTTGCTGCAGGTACAGACACTACCTACACAGTCCTAGAATGGGAAATGACAGAATTGTTAAGACACCAAACTGTGATGCATAAATTGCAAGATGAGGTCAGAACTGTGGTTGGAAAAAAAACTCAGGTAACTGAAGACGATTTGGTTAACATGAACTACTTGAAAGCTGTGATCAAAGAAACTCTTCGCCTGCACGCCCCGATTCCATTATTAATCCCTCGGAAATCTATGGAAGATATCAAACTAGATGGCTATGACATTGCAGCTGGAACACAGGTAATAGTGAATGCTTGGGCAATTGCAAGAGACCCTTCAATTTGGGAAGAACCTCTAGAGTTTAAACCAGAAAGGTTTATGAACAGTTCAATAGATTTCAAAGGATTGAATTTTGAACTTATCCCATTTGGAGCAGGAAGGAGGGGTTGTCCTGGAGTGTTATTTGCCACTGCTGTAAATGAATTGGTTCTAGCAAACCTTGTTTACCAATTTGATTGGAAATTGCCTGATGGAGTAGCAGGGAAGAATTTGGACATGTCTGAGACTGGTGGCATTACTTGTCATAGAAAATACCCTCTACTTGCAGTAGCTACAAAATATGACAGAAATGAATAA 1578 0.3802 MSTFLQTFLSQESLHSIFPMLFFTIFPLFLISLFFIIKYWYVDNSSVTQKNSLPSPPRLPLLGNLHQLGLLPHRSLQNLSHKYGPLMLLYFGKVPVLVVSSADAARKVMKTYDLVFSDRPQSKIFDILFYGFKDVASCGYGEYWRQIKSLCVLHLLSNKRVRSYHRVREEETLRMVEYIKEHCCSSALPLNLTELCSTITNDIVCRVALGKRYREGREMKLQEVLLEFGELLGTVCIGDYIPWLDWLGKVNGFYIRAEKCAKYLDEFIEQVIEEHISHRLRNGTVDNEEQGDFVDVLLSVQKTNAIGFPIDRTSIKALILDMFAAGTDTTYTVLEWEMTELLRHQTVMHKLQDEVRTVVGKKTQVTEDDLVNMNYLKAVIKETLRLHAPIPLLIPRKSMEDIKLDGYDIAAGTQVIVNAWAIARDPSIWEEPLEFKPERFMNSSIDFKGLNFELIPFGAGRRGCPGVLFATAVNELVLANLVYQFDWKLPDGVAGKNLDMSETGGITCHRKYPLLAVATKYDRNE* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1885 525 PANTHER CYTOCHROME P450 71B11-RELATED 23 522 - -
Tpr3g1885 525 Pfam Cytochrome P450 54 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1885 525 PANTHER CYTOCHROME P450 FAMILY PROTEIN 23 522 - -
Tpr3g1885 525 Gene3D Cytochrome P450 40 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1885 525 SUPERFAMILY Cytochrome P450 54 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1885 525 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1885 525 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1885 525 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1885 525 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1885 525 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1885 525 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1885 525 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1885 525 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1885 525 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1885 525 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1885 525 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1885 525 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1885 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1885 Tpr-Chr3 17030861 17033774 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1885 49 519 Cytochrome P450 AT3G48270 51.907 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1885 - - gmx:100819183 683.33