Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1883 ATGTCCACCTTTCTACAAAGTTCTCTTTCACAAGAAACCTTATATTCATTATTCCCTATGCTTTTCTTCACTATCTTCCCACTATTTCTTATTTCTCTTTTCTTCATAATCAAACATTGGTATTTCAACAATTTTTCGGTCACACGAAAAAACTCACCACCTTCACCTCCAAGATTACCTCTACTTGGTAATCTCCATCAACTTGGCTTATTACCTCACCAGTCACTTCAAAATTTGTCACACAAATATGGCCCTTTAATGCTTCTTTATTTTGGGAAGGTTCCAGTACTTGTGGTTTCTTCTGCTGATACAGCTAGTAAAGTAATGAAAACTCATGACTTGGTTTTCTCTGATAGGCCACGTAGTAAAATGTTTGATATCCTTTTATATGGTTCCAAAGATGTGGCAGGCTGTACATATGGTGAGTATTGGAAACAAGTAAGGAGTCTCAGTGTGTTACACCTTCTTAGTAACAAAAGGGTTCGATCTTATCGTCATGTGAGAGAGGAAGAAGCTTTAAGAATGATAGAATATGTTAAGGAGAGTTGTTCTTCTGCTTTGCCATTGAATTTAACTGAGTTGTGTTCTACAATTACTAATGATATAGTATGTAGGGTGGCTTTAGGAAAAAGATACCGTGAAGGTGGAAGGAAGAAATTTCAGGAGGTGTTGTTGGAGTTTGGAGAGTTATTGGGCACTGTAGTTATTGGAGACTATATACCTTGGCTTGACTGGTTGGGGAAAGTTAATGGTTTGTATAGCAGGGCAGAAAAATGTGCCAAATATTTGGATGAGTTCATGGAACAAGTTATTGAGGAGCACATTAGTCATAGGTTGAGGAATGTTAGTGTTGACGGTGAGGATGATAATGATTTTGTGGATGTTTTGCTTTCTATTCAAAAGAATAATGCTATTGGCTTCCCAATTGATAGAACTTCAATAAAAGCTTTGATACTAGACATGTTTGTTGCAGGTACCGATACTACTTACACAGTCCTAGAATGGGCATTGACAGAACTGTTAAGACACCAAACTGTGATGCATAAATTGCAAGATGAGGTCAGAACTGTTGTTGGTAACAGAACTCATGTAACTGAGGAGGATTTGGTTAACATGAACTTCTTGAAGGCTGTGATCAAAGAAACTCTTCGTTTACACATCCCGGATCCCTTATTAGTCCCTCGGAAAACTATGGAAGATATCAAACTAGATGGCTATGACATTGCAGCCGGAACACATGTAATCGTTAATGCTTGGGCAATTGCAAGAGACCCTACAAGTTGGGAAGAACCTCTAGAGTTTAAACCAGAAAGGTTTATTAACAGTTCAATTGATTTTAAAGGATCGGACTTTGAACTTATCCCATTTGGAGCAGGAAGGAGGGGTTGTCCTGGAGTTTCATTTGCTATTGCTGTGAATGAATTGGTGCTAGCAAACCTTGTTTACCAATTTGATTGGAAATTGCCTGATGGAGTAGCAGGGAAGGATTTGGACATGTCTGAGACTGGTGGCATTACTTGTCATAGAAAATATCCTCTACTTGCAGTAGCTACAAAAATATGA 1563 0.382 MSTFLQSSLSQETLYSLFPMLFFTIFPLFLISLFFIIKHWYFNNFSVTRKNSPPSPPRLPLLGNLHQLGLLPHQSLQNLSHKYGPLMLLYFGKVPVLVVSSADTASKVMKTHDLVFSDRPRSKMFDILLYGSKDVAGCTYGEYWKQVRSLSVLHLLSNKRVRSYRHVREEEALRMIEYVKESCSSALPLNLTELCSTITNDIVCRVALGKRYREGGRKKFQEVLLEFGELLGTVVIGDYIPWLDWLGKVNGLYSRAEKCAKYLDEFMEQVIEEHISHRLRNVSVDGEDDNDFVDVLLSIQKNNAIGFPIDRTSIKALILDMFVAGTDTTYTVLEWALTELLRHQTVMHKLQDEVRTVVGNRTHVTEEDLVNMNFLKAVIKETLRLHIPDPLLVPRKTMEDIKLDGYDIAAGTHVIVNAWAIARDPTSWEEPLEFKPERFINSSIDFKGSDFELIPFGAGRRGCPGVSFAIAVNELVLANLVYQFDWKLPDGVAGKDLDMSETGGITCHRKYPLLAVATKI* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1883 520 PANTHER CYTOCHROME P450 71B11-RELATED 23 519 - -
Tpr3g1883 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Tpr3g1883 520 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1883 520 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1883 520 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1883 520 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1883 520 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1883 520 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1883 520 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1883 520 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1883 520 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1883 520 Gene3D Cytochrome P450 42 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1883 520 PANTHER CYTOCHROME P450 FAMILY PROTEIN 23 519 - -
Tpr3g1883 520 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1883 520 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1883 520 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1883 520 Pfam Cytochrome P450 53 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1883 520 SUPERFAMILY Cytochrome P450 53 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1883 Tpr-Chr3 17022417 17026467 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1883 49 518 Cytochrome P450 AT3G48270 52.331 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1883 - - gmx:100819183 694.501