Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1881 ATGTTTGCTGCTGGAACTGATACTACCTACACAGTCCTGGAATGGGCATTGTCAGAACTACTAAGACATGAAACTGTGATGCATAAATTGCAAGATGAGGTCAGAACTGTGGTTGGTAACAGAACTCATGTAACTGAGGAGGATTTGGTTAACATGAACTACTTAAAGGCTGTGATCAAAGAAACTCTTCGCCTGCATATCCCGGTACCCTTATTAGTCCCTCGGAGAACTATGGAAGATATCAAATTAGATGGCTATGACATAGCAGCTGGTTCACAGGTGATAGTGAATGCTTGGGCAATTGCAAGAGACTCTTCAATTTGGGAGAAACCTCTAGAGTTTAAACCAGAAAGGTTTATGAATAGTTCAATAGATTATAAGGGATTGGATTTTGAACTTATACCATTTGGAGCAGGAAGGAGAGGTTGTCCTGGAGTGACTTTTGCTATTTCTATCAATGAATTGGTTTTAGCAAACCTTGTTAACCAATTTGATTGGAAATTGCCTGATGGAGTAGAAGGAAAGGATTTGGACATGTCTGAAACTAATGGCCTTACTTGTCGTCGAAAATATCCTCTAATTGCAGTTGCTACCAAATATGACAGAAATGAATAA 615 0.3919 MFAAGTDTTYTVLEWALSELLRHETVMHKLQDEVRTVVGNRTHVTEEDLVNMNYLKAVIKETLRLHIPVPLLVPRRTMEDIKLDGYDIAAGSQVIVNAWAIARDSSIWEKPLEFKPERFMNSSIDYKGLDFELIPFGAGRRGCPGVTFAISINELVLANLVNQFDWKLPDGVEGKDLDMSETNGLTCRRKYPLIAVATKYDRNE* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1881 204 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1881 204 PRINTS E-class P450 group I signature 56 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1881 204 PRINTS E-class P450 group I signature 97 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1881 204 PRINTS E-class P450 group I signature 133 143 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1881 204 PRINTS E-class P450 group I signature 143 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1881 204 Pfam Cytochrome P450 1 185 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1881 204 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 136 145 IPR017972 GO:0005506|GO:0016705
Tpr3g1881 204 SUPERFAMILY Cytochrome P450 1 198 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1881 204 PRINTS P450 superfamily signature 4 21 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1881 204 PRINTS P450 superfamily signature 57 68 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1881 204 PRINTS P450 superfamily signature 134 143 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1881 204 Gene3D Cytochrome P450 1 202 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1881 204 PANTHER CYTOCHROME P450 71B11-RELATED 1 201 - -
Tpr3g1881 204 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1881 Tpr-Chr3 16999526 17000140 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1881 1 200 Cytochrome P450 AT3G48280 51.741 1.73e-76 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1881 - - gmx:100819183 319.701