Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1880 ATGTCAACCTTTCTACAAACTTCTTTTTTAGAGAAAAACTTCTACTCATTATTCCCTATGCTTTTTGTCACTATCTTTCTACTAGTACTTTCTCTTTTCTTCTTCATCAAATGGTTTTTCAACAATTCTTCTGTCACACAAAAAAACTCACCACCTTCACCTCCAAGATTGCCTATACTTGGTAATCTCCATCAACTTAGCTTATTCCCTCACCGATCACTCCAAAATTTTGCTCAAAAATATGGACCTCTAATGCTTCTTTATTTTGGAAAGGTTCCAGTCATTGTAGTTTCCTCTGCTGATGCAGCTAGTAAAGTATTGAAAACTCATGACTCGGTCTGTTGTGATAGGCCACATCGTAAAATCTTCGATATCCTTTTCTACTGTTCCAAAGATGTGGCAAGTTGTGGATATGGTGAGTATTGGAAACAGGTAAGGAGTCTCAGTGTGATAAACCTTTTGAGTAACAAAAGAGTTGAATCTTATCGTTGTATTAGAGAGGAAGAAACTGCAAAAGTGATGCAAAGCATCATTCAACAGAAGAATACTTCTGTGAATTTATCAGAGGTGTGCTCTACAATTACTAATGATATAACATGCAGGGTGGTTCTAGGAAAAAGATACCGTGAGGAAGGCGGAGTGTTGCCGGAGCTAATGTTGGAGTTTGGAGAGTTATTGATTATTTTCTTTATAGGAGATTATATACCTTGGCTTAGTTGGTTGGGTAAGTTTAATGGTTTTTATAGCAAGGCGGAAAAAGTGGCCAAACATTTGGATGAATTTTTTGACAAAGTTATTGAGGAGCACATCAGTGGTAGTAGATTTGATGGCCATGTTGGTGAAGATAACAGTGATTTTGTGGACGTTTTGCTTTCAGTTCAAAAGAGCAATGATACTGGCTTCTCATTGGATAAAACTGCAATTAAGGGTTTGTTACTGGACATGTTTGCTGCTGGAACTGATACTACCTACACAGTCCTAGAATGGGCATTGTCAGAACTACTAAGACATCAAACTGTGATGCATAAATTGCAAGATGAGGTCAGAACTGTGGTTGGTAACAGAACTCATGTAACTGAGGAGGATTTGGTTAACATGAACTACTTAAAGGCTGTGATCAAAGAAACTCTTCGCCTGCATATCCCGGTACCCTTATTAGTCCCTCGGAGAACTATGGAAGATATCAAATTAGATGGCTATGACATAGCAGCTGGTTCACATGTGATAGTGAATGCTTGGGCAATTGCAAGAGACTCTTCAATTTGGGAGAAACCTCTAGAGTTTAAACCAGAAAGGTTCATGAATAGTTCAATAGATTATAAAGGATTGGATTTTGAACTTATACCATTTGGAGCAGGAAGGAGAGGTTGTCCTGGAGTGACTTTTGCTATTTCTATCAATGAATTGGTTTTAGCAAACCTTGTTAACCAATTTGATTGGAAATTGCCTGATGGAGTAGAAGGAAAGGATTTGGACATGTCTGAAACTAATGGCCTTACTTGTCGTCGAAAATATCCTCTAATTGCAGTTGCTACCAAATATGACAGAAATGAATAA 1557 0.3776 MSTFLQTSFLEKNFYSLFPMLFVTIFLLVLSLFFFIKWFFNNSSVTQKNSPPSPPRLPILGNLHQLSLFPHRSLQNFAQKYGPLMLLYFGKVPVIVVSSADAASKVLKTHDSVCCDRPHRKIFDILFYCSKDVASCGYGEYWKQVRSLSVINLLSNKRVESYRCIREEETAKVMQSIIQQKNTSVNLSEVCSTITNDITCRVVLGKRYREEGGVLPELMLEFGELLIIFFIGDYIPWLSWLGKFNGFYSKAEKVAKHLDEFFDKVIEEHISGSRFDGHVGEDNSDFVDVLLSVQKSNDTGFSLDKTAIKGLLLDMFAAGTDTTYTVLEWALSELLRHQTVMHKLQDEVRTVVGNRTHVTEEDLVNMNYLKAVIKETLRLHIPVPLLVPRRTMEDIKLDGYDIAAGSHVIVNAWAIARDSSIWEKPLEFKPERFMNSSIDYKGLDFELIPFGAGRRGCPGVTFAISINELVLANLVNQFDWKLPDGVEGKDLDMSETNGLTCRRKYPLIAVATKYDRNE* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1880 518 PANTHER CYTOCHROME P450 FAMILY PROTEIN 23 515 - -
Tpr3g1880 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Tpr3g1880 518 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1880 518 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1880 518 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1880 518 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1880 518 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1880 518 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1880 518 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1880 518 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1880 518 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1880 518 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1880 518 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1880 518 Pfam Cytochrome P450 51 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1880 518 SUPERFAMILY Cytochrome P450 51 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1880 518 Gene3D Cytochrome P450 44 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g1880 518 PANTHER CYTOCHROME P450 71B11-RELATED 23 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1880 Tpr-Chr3 16990839 16993168 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1880 21 514 Cytochrome P450 AT3G48280 46.263 3.55e-170 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1880 - - gmx:100819183 664.07