Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1868 ATGGCATATAGACGTTTCCTCTTACAAAGAGGAAACAACCTCATAGATCGAAGATGCCACCCATCTTTCACCTATATCCTCCACAACGATGAACCCAAACAAAATGAAACAAAATCATCTTCAACAGAAATTAGTAACAGTTTTATTCAAAGAAGATCCTTTGGAAACTCTGTTAATGGATCAATAGGTTTTTTCTCGTCTTCTAAACATAGACAAAGCTTTTCTCCTTTTGCTGGATATAATTTGTGTAGAAATATGTCGACACTGGATCAAGCTGGTTCGGATAAGATTACTATAATGGCTGATGTTGCTGATGTTCTTAAGGATTCGACAATGGAGGCGGCTGTTTCTTCTCAGGGTCCTGTTGTTAGTGAAGTTGCTATTGCTGCTGCTGATTCTTATTTGCCTGTACAAGCTTTGCAGTATGTTATTGATGCTGTTCATACCTACACCGGGCTAAATTGGTGGGCGGCTATAATTCTAACAACTCTCTTGATTCGAAGCGCAACTGTTCCACTCTTAATAAATCAACTCAAGGCCACTTCTAAGCTTACACTAATGAGGCCTCGTTTGGAAGAGATAAAGGAAGAGATGGAGGGGAAGACAATGGATCCCGAGGCTGTTGCTGAAGGTCAGAAGAAGATGAATAAGCTATTCAAAGAATATGGTGTGAGTCCATTTACGCCATTGAAAGGACTCTTTATTCAAGGTCCTGTCTTCATTAGTTTTTTTCTTGCGATAACCAACATGGCTGAAAAAATGCCATCATTCAAGCATGGTGGAGCTTTATGGTTTACTGATCTCTCAACTCCAGATGCCTTATACATTTTTCCAGTTTTAACTGCATTGTCATTCTTAGTAGTTGTAGAGTGTAATATGCAAGAAGGAATGGAAGGAAATCCTGTGGCTGGCACCATGAAAAATTTCTCAAGGGTTCTTGCTCTTCTTTCAGTTCCTTTCACCATGAGTTTTCCGAAGGCTATATTTTGTTACTGGGTTACATCAAATTTGTTTTCACTTTCATATGGAATGGTGCTTAAAGTTCCTGGTGTAAAGAAAAAGTTGGGTATTCCTGATTTACCTCCTCCAGAACCCAGCAGTTCTCAGAAAGCTCCCTTCTCTATATTTGAAGCAATAAAAAAAGCCGCATCAGTGGCACGTCAAAGCTCAATGCCAGTAGAATCATCAAATCAATCAAACAAAAAGTTACCTTCACCTTCTTCTTCTGCCGTTATTAGCCAAAGGCTCAGAAGCTTAGAGAAAAAAGTAAAAGGAAGAAAGAAAAGCAAGAAGTTGTGA 1299 0.3911 MAYRRFLLQRGNNLIDRRCHPSFTYILHNDEPKQNETKSSSTEISNSFIQRRSFGNSVNGSIGFFSSSKHRQSFSPFAGYNLCRNMSTLDQAGSDKITIMADVADVLKDSTMEAAVSSQGPVVSEVAIAAADSYLPVQALQYVIDAVHTYTGLNWWAAIILTTLLIRSATVPLLINQLKATSKLTLMRPRLEEIKEEMEGKTMDPEAVAEGQKKMNKLFKEYGVSPFTPLKGLFIQGPVFISFFLAITNMAEKMPSFKHGGALWFTDLSTPDALYIFPVLTALSFLVVVECNMQEGMEGNPVAGTMKNFSRVLALLSVPFTMSFPKAIFCYWVTSNLFSLSYGMVLKVPGVKKKLGIPDLPPPEPSSSQKAPFSIFEAIKKAASVARQSSMPVESSNQSNKKLPSPSSSAVISQRLRSLEKKVKGRKKSKKL* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1868 432 PANTHER OXA1 76 402 IPR001708 GO:0016021|GO:0032977
Tpr3g1868 432 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1L 76 402 - -
Tpr3g1868 432 MobiDBLite consensus disorder prediction 387 432 - -
Tpr3g1868 432 Pfam 60Kd inner membrane protein 155 341 IPR001708 GO:0016021|GO:0032977
Tpr3g1868 432 MobiDBLite consensus disorder prediction 388 415 - -
Tpr3g1868 432 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 154 341 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1868 Tpr-Chr3 16908227 16916305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1868 48 353 Chloroplast and Mitochondria Gene Families AT2G28800 24.921 9.03e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1868 K03217 - gmx:100817052 582.022