Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1864 ATGGACAGTACAGATTCATCATCATGTTCTCAACATCCACACCTACCACCAGGCTTTAGATTCCACCCAACTGATGAAGAACTTGTCGTTCACTACCTTAAGAGAAAAGCTGCATCAGCACCTCTTCCAGTAGCTATCATAGCAGAGATTGATCTGTACAAATTCGACCCATGGGAACTCCCAAGTAAAGCAACTTTTGGGGAACAAGAGTGGTACTTTTTCAGCCCAAGGGATAGGAAATACCCAAATGGGGCCCGGCCCAATAGGGCTGCAACTTCTGGGTATTGGAAAGCTACTGGAACTGATAAGCCTATATTAACATCTGATGGGAATCAGAAAGTTGGAGTTAAAAAAGCACTTGTTTTTTATGGAGGGAAGCCACCAAAAGGGGTTAAAACTAATTGGATTATGCATGAGTATAGGCTTATCACTGATCACAATAATATTAGTAATAATCATCATTCCTATAATGCAAGTTCAAAAACTCCACTTCTGCCTTCTGATCATCCTCCAAACAATAACAAGAAGAATTCTTTGAGGCTTGATGATTGGGTTTTGTGCCGAATATACAAGAAAAGCAACAGTAGCACCATGCCAAGGCCACCACTAATGGATCAATATGATAAAGAGCTTTCAATGGAACATACATATAATATGCAACAAAACTCTAAACCTCTTCCATGTTCAAGAAGCACAAGTTATGGACTAGAAAATGATGACAATTTCTTTGATGGAATCTTAGCAACTGATCAAGTAATGCAAAATGGTTGTGAAATAAACTCAAATAAGGTTGATCATAACAATGAATCATTCCCTATGAAACGTGCACTAAATGCATCATCACAATTTTGGCATGAAACAGGTTCACCAGGGTCATCTTCTTCAAGTAAGAGATTCCATGGAGATCTTAATAATAGTGGCAACAACAATATTGAGGAAAATAATTCATTTGTTTCTTTGCTTAGCCAGCTTCCACCAAACACAACTTTTCATCAAAATTCAATTCTTGGAGATGCAGGTGTAATGAGGCAACAATTTCAACTTCCGGACATAAATTGGAACTAA 1065 0.3812 MDSTDSSSCSQHPHLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEIDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSDGNQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLITDHNNISNNHHSYNASSKTPLLPSDHPPNNNKKNSLRLDDWVLCRIYKKSNSSTMPRPPLMDQYDKELSMEHTYNMQQNSKPLPCSRSTSYGLENDDNFFDGILATDQVMQNGCEINSNKVDHNNESFPMKRALNASSQFWHETGSPGSSSSSKRFHGDLNNSGNNNIEENNSFVSLLSQLPPNTTFHQNSILGDAGVMRQQFQLPDINWN* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1864 354 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Tpr3g1864 354 MobiDBLite consensus disorder prediction 156 177 - -
Tpr3g1864 354 SUPERFAMILY NAC domain 10 192 IPR036093 GO:0003677|GO:0006355
Tpr3g1864 354 ProSiteProfiles NAC domain profile. 15 192 IPR003441 GO:0003677|GO:0006355
Tpr3g1864 354 PANTHER NAC TRANSCRIPTION FACTOR 56 1 329 - -
Tpr3g1864 354 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 329 - -
Tpr3g1864 354 Gene3D NAC domain 24 197 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1864 Tpr-Chr3 16831511 16834366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1864 5 354 NAC Transcription Factor Family AT1G61110 53.994 5.47e-113 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr3g1864 NAM 9.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1864 - - gmx:100797132 482.256