Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1863 ATGGATAATCTAGTATTAAAGTTAAAGAGTTTATACACTTTGGTTATTTTACTCTTTGTACTATGTTTTAAGCTTTCTGTTTCATCTAGATCACATAGACACTATTATGGTGGTGGAAGAAAATTGAGAAGCTCTAGTGATAATGGTAGTGATCTTGTGACTAATTTGCCTGGTCAGCCTCAGGTAGATTTTAAGCACTATGCTGGTTATGTCACTGTCAATGAAACTAATGGAAGAGAACTCTTTTATTGGTTCTATGAGGCTATGACTAAGCCAGAAGAGAAACCATTGGTGTTATGGCTTAATGGAGGTCCTGGGTGCTCTTCTGTAGGATATGGAGCAACACAAGAGATTGGTCCATTTTTAGTGGATAATAATAATGATGGACAAGGCCTTAAATTTAATAACTTCTCATGGAACAAAGAAGCCAACATGTTATTCCTAGAATCTCCTGTCGGAGTTGGCTTTTCATACTCAAATACAACCAGTGATTATGAACAATTGGGTGATGATTTAACAGCTAATGATGCTTACAATTTTCTACACAATTGGTTCCTCAAGTTTCCATCATATAGAACTAAGACATTTTACATAGCAGGGGAGAGTTATGCAGGAAAGTATGTACCAGAACTTGCTGAACTTATCCATGATAGGAACAAGGACCCATCCCTTTACATTGATCTCAAGGGTATTTTGCTAGGTAACCCTGAAACATCTGATGCTGAGGATTGGATGGGACTAGTTGATTATGCTTGGAGTCATGCTGTGATATCTGATGAAACACATAAAACAATAAAAAAAAGTTGTGATTTTAATAGTAGTGATCCATGGAAAAATGAAGATTGTGATCAAGCTGTTGATGAAGTACTTAAACAGTATCATGAAATTGATATCTATAGTCTTTATACCTCTGTCTGTTTTGCCTCTACAGCACGTTCAAATGGTCAAACAATGCAAACTTCCACCAAACGTTCATCTAAAAGTTCATCCAAAATGATGCCTAGAATGATGGGTGGTTATGACCCATGCTTGGATGATTATGCGAAAGCTTTTTATAATAGACCAGATGTTCAGAAGGCCCTTCATGCTAGTGATGGTCACAATCTAAAGAATTGGAGTATTTGCAACAACAAGATATTCAATGATTGGGCAGATTCAAAACCATCAGTTATACCAATTTACAAGAAACTTATTTCAGCAGGACTTAGGATTTGGGTTTACAGTGGAGACACAGATGGTAGAGTACCAGTTCTTTCAACTAGGTACAGCTTAAGTACTCTAGCTTTGCCAGTTACTAAACCATGGAGGCCTTGGTACCATGAAAATGAGGTTAGTGGATGGTATGAAGAATATCAAGGGCTTACATTTGCAACATTTAGAGGAGCTGGTCATGCAGTTCCATGTTTTAAACCAAGCAACTCACTTGCATTTTTCACCTCCTTTCTACATGGAGAATCACCTCCTTCTACAAAATAA 1476 0.3706 MDNLVLKLKSLYTLVILLFVLCFKLSVSSRSHRHYYGGGRKLRSSSDNGSDLVTNLPGQPQVDFKHYAGYVTVNETNGRELFYWFYEAMTKPEEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDNNNDGQGLKFNNFSWNKEANMLFLESPVGVGFSYSNTTSDYEQLGDDLTANDAYNFLHNWFLKFPSYRTKTFYIAGESYAGKYVPELAELIHDRNKDPSLYIDLKGILLGNPETSDAEDWMGLVDYAWSHAVISDETHKTIKKSCDFNSSDPWKNEDCDQAVDEVLKQYHEIDIYSLYTSVCFASTARSNGQTMQTSTKRSSKSSSKMMPRMMGGYDPCLDDYAKAFYNRPDVQKALHASDGHNLKNWSICNNKIFNDWADSKPSVIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLSTLALPVTKPWRPWYHENEVSGWYEEYQGLTFATFRGAGHAVPCFKPSNSLAFFTSFLHGESPPSTK* 492
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1863 491 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 488 IPR001563 GO:0004185|GO:0006508
Tpr3g1863 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 147 IPR001563 GO:0004185|GO:0006508
Tpr3g1863 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 148 158 IPR001563 GO:0004185|GO:0006508
Tpr3g1863 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 184 209 IPR001563 GO:0004185|GO:0006508
Tpr3g1863 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 454 467 IPR001563 GO:0004185|GO:0006508
Tpr3g1863 491 Gene3D - 343 379 - -
Tpr3g1863 491 Gene3D - 390 484 - -
Tpr3g1863 491 ProSitePatterns Serine carboxypeptidases, serine active site. 198 205 IPR018202 GO:0004185
Tpr3g1863 491 Gene3D alpha/beta hydrolase 48 308 IPR029058 -
Tpr3g1863 491 PANTHER CARBOXYPEPTIDASE 13 488 - -
Tpr3g1863 491 Pfam Serine carboxypeptidase 57 484 IPR001563 GO:0004185|GO:0006508
Tpr3g1863 491 SUPERFAMILY alpha/beta-Hydrolases 48 485 IPR029058 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr3g1863 Tpr-Chr3 16823444 16829000 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1863 348 485 Calmodulin-binding Proteins AT2G22960 33.813 1.19e-16 76.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1863 K16297 - gmx:100793427 881.708
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1863 3 16823444 16829000 Tpr3g1863 3 16823444 16829000 ECH
Tpr3g1863 3 16823444 16829000 Tpr2g2411 2 29058270 29062060 PCT