Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1826 ATGGGTGAAGAAGATTTAATCGGAGATTCTCAATTGGCGGGTGTACCCACCGGAGCTCATCGTCTCCGGCGAGCCGTGGAACTCATTTGTTCGTTACTATCTCTTTCTCTGTCAATTAGAGTCTTCGCCGGAAAATGGCAACTCATTCGTAACAAGCTTGAAGAGCTTCATTCTGGTTTAATCTCTGCCGAGAATTGTGATTCCGGCGAGAATCCGTCGTTTTCTAGGTTGGTAACTTTGATAGTAGCGACGGTTAGTGAGTGTCACGATCTGGGTCAGCGTTGTGTTGATGTTTCGTATAGTGGGAAGCTTTTGATGCAGAGTGATTTGGATGTAGCGTTTGCGAAGCTTGATGGTTTAGCTAAGAAGCTTTCTGAGATATACAAAACGGGTCTTTTAACAAATGGGTTTGCGCTTGTTGTTTCAAAACCGTGTCTTGGTGCTTGTAAAGAGGATATGAGGTTTTATGTGAGAGACCTTTTGACGAGGATGAAGATTGGTGATTTGGGTATGAAGAAACAAGCTTTAAGGAATCTTCTTGAGGTTGTTGTCGAGGATGAGAAGTATGTTAAGGTTATTGTTGTTGATGTTAGTGATGTTGTTCATGTTCTTGTTGGGTTTTTGTGTTCTGCTGAGGTTGAAATTCAAGAGGAGAGTGCAAAGGTTGTTTCTGTTGTTGCTGGTTTTGATTCATATAAAGGGGTTTTGATTAGTGCTGGTGTTATCGCGCCTTTGATTCGTGTTTTGGATTGTGGGAGTGAATTGGGGAAAGTTGCGTCTGCGAGGTGTTTGATGAAATTGACTGAGAATTCGGACAATGCTTGGGCTGTTTCTGCTCATGGTGGTGTTACTGCTTTGTTGAATATTTGTGGGAATGATGTTTGTAAAGGGGATTTGGTTGGTTTTGCTTGTGGGGTGTTGAGAAATCTTGTTGGTGTTGAGGAAGTTAAGAGATTTATGGTTGAGGAGGATGCCGTGTCGACGTTTATCAGGCTTGTGAAATCAAAGGAGGAAGCAATTCAGGTGAATTCAATAGGGTTCATTCAGAATATTGCCTTTGGAGATGAGGTAATTAGACAAATGGTGATTAGAGAAGGCGGAATCCGTGCTTTGTTACGCGTTTTGGATCCTAAATGGTCCTTTTCGTCGAAAACAAAGGAAATAGCAATGAGGGCTATTGAGAGTTTGTGTTTTACATCATCTAGTTCTGTAAGTATTTTAATGAGTTATGGTTTTGTCGATCAATTGTTATATTATGTTCGAAATGGTGAAGTCTCAATTCAAGAATTGGCATTGAAAGTGGCATTTAAATTATCTGGAACATCTGAAGAAGCTAAGAAAGCAATGGGTGATTCTGGTTTTATGGCAGAATTTGTTAAGTTTCTAAATGCAAAATCATTCGAAGTTCGCGAAATGGCAGCCGAGGCACTCTCCGGCATGGTCACGGTACCTAAAAACCGAAAGAGATTTGTACAAGATGACAATAACATAGCCCTACTTCTTCAATTGCTTGATCCAGAAGAAGGAAATTCAGGTAACAAAAAGTTCTTAATCTCAATTTTATCATCATTGACAAGTTGCAATAGTGGAAGGAAAAAGATTGTTAGTTCTGGATATGCAAAAAACATAGACAAATTAGCAGAAGCTGAAGTTTCTTCAGATGCTAAAAAACTTGTCAAGAAACTATCGACAAACCGGTTTCGCAGTATGTTGAATGGAATCTGGCATTCATGA 1734 0.4002 MGEEDLIGDSQLAGVPTGAHRLRRAVELICSLLSLSLSIRVFAGKWQLIRNKLEELHSGLISAENCDSGENPSFSRLVTLIVATVSECHDLGQRCVDVSYSGKLLMQSDLDVAFAKLDGLAKKLSEIYKTGLLTNGFALVVSKPCLGACKEDMRFYVRDLLTRMKIGDLGMKKQALRNLLEVVVEDEKYVKVIVVDVSDVVHVLVGFLCSAEVEIQEESAKVVSVVAGFDSYKGVLISAGVIAPLIRVLDCGSELGKVASARCLMKLTENSDNAWAVSAHGGVTALLNICGNDVCKGDLVGFACGVLRNLVGVEEVKRFMVEEDAVSTFIRLVKSKEEAIQVNSIGFIQNIAFGDEVIRQMVIREGGIRALLRVLDPKWSFSSKTKEIAMRAIESLCFTSSSSVSILMSYGFVDQLLYYVRNGEVSIQELALKVAFKLSGTSEEAKKAMGDSGFMAEFVKFLNAKSFEVREMAAEALSGMVTVPKNRKRFVQDDNNIALLLQLLDPEEGNSGNKKFLISILSSLTSCNSGRKKIVSSGYAKNIDKLAEAEVSSDAKKLVKKLSTNRFRSMLNGIWHS* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1826 577 Gene3D - 156 566 IPR011989 -
Tpr3g1826 577 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 19 577 - -
Tpr3g1826 577 SMART arm_5 354 398 IPR000225 GO:0005515
Tpr3g1826 577 SMART arm_5 313 353 IPR000225 GO:0005515
Tpr3g1826 577 SMART arm_5 229 269 IPR000225 GO:0005515
Tpr3g1826 577 SMART arm_5 186 228 IPR000225 GO:0005515
Tpr3g1826 577 SMART arm_5 442 482 IPR000225 GO:0005515
Tpr3g1826 577 SMART arm_5 270 312 IPR000225 GO:0005515
Tpr3g1826 577 SUPERFAMILY ARM repeat 152 546 IPR016024 -
Tpr3g1826 577 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 19 577 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1826 204 434 U-box Gene Family AT3G54790 25.322 8.88e-10 59.7