Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1817 ATGGGCAAGATTATAGGATTCAAAGTTTCATTCTTTATGTCGCTGTTGTTGTTTTTCCTCTGTTTCCTCTGTTTTTATCCTCTGTTTTTGCATGCAGCAAACTCTATAACACAGAATGAATCTATCAAAGATGGTTCCACTTTGGTGTCAGATGGTCTCAAATTCGAAATGGGTTTCTTCAGTTTGAATGATTCTTCTTCAAGATACGTTGGAATTTGGTATCACAACGTTACTTCAGCATATGTTTGGGTTGCAAACAGAGAAAAACCTATCAAAAACAGAGAAGGGTCTATCACAATAAAAAATGATGGAAACTTGGTTGTTATTGATGGAGAAAACAATGAGATTTGGTCAAGTAATGTATCAAAAACTCCGATAAATAACTCACAAGTTGTTCTTCATGATAATGGAAATCTTATTCTTTCAGATAGAGTAGTTGGAAAAGATATTTGGCAAAGTTTTGAAGACCCAACTGATACATATCTTCCTGGTATGAAAGTTCCGGCGAGCGGTGGAAATGGAATGGGAAAGGATGCTACTTTTTGTTCATGGAAATCAGAGAATGATCCTTCATTTGGAAACTATTCAATGAGTGTTGATTCAGAAGCTTCACCACAGATAGTGATTATGGAAGGAGAAAAAAGAAGATGGAGAAGTGGTTATTGGGATGGTAGAGTTTTCTCAGGTGTACCAAATATGACAGGAAGTTATCTTTTCGGTTTTCGGCTTAACACAGATGATAAAGGTGAAAGGTATTTTGTTTATGAAGCATTGAATACTACTGATAAGATAAGGTTTTTGATTAGTTATGATGGATTTGAGAAACAATTTAGGTGGAATGAAAATGAGAAAAAATGGAATGTGTTACAAAGTGAGCCTTTTAAGAAGTGTGAGTTTTATAATTCATGTGGTAGTTTTGCAGTATGTGATGATTCTGATTCAAGTTTATGTAAGTGCATAAAAGGGTTTGAACCAAGAGATATGAATGGTTGGAAAAATGGGAATTGGTCAAAAGGGTGTAAGAGGATGACACCATTGAAGAGTGAGAGAAGTAGTAATAGTTCTGGTGGAGAAGATGGTTTTTTGGTGCAAAGGGATTTGAAGTTACCTGATTTTGCACATTTGGTGAATGCTGTTGATTGTGAAGGAAATTGTTTGAAGAATAGTTCTTGTACTGCTTATGCAAATACTATTGGAATTGGATGCATGGTTTGGTTTGGGGAGTTAGTTGATTTTCAAAGGTTAGAAAATTATGGAAATACACTCAACATTCGTCTTGCTGATTCCGATTTAGGTGATGGGGGAAAAAAGACCAAAATTGGAATAATACTTGGTGTTGTGGGGGGGCTTATCTGCCTTGGAATCTTTGTATGGCTACTATGGAGGTTTAAGAGAAAACTCAAAGTTTCCTCAACTTCTACTTCCAACATTAATGGTGAACCATCAAAGAGTCCAAACTTATTACTATCAGCAGAATTATCAGGACCGGTTGGTCTTAGTCCGCAAGGGAGTCCACTCAATAATGCAGAATTCTTCAATTTTAGTATCATTGTAATAGCAACAAACAATTTTTCAGAAGAAAATAAGCTCGGACAAGGTGGATTTGGTCCTGTTTACAAGGGAAAGCTTCCCGGGGGAGTAGAAATCGCGGTCAAGAGGCTTTCTAGACAGTCGAACCAAGGATCAGATGAGTTCAAGAATGAAATGATGCTTATAGCCAAATTACAGCATAGAAATCTTGTTAGACTATTGGGATGTTCAGTTGAAGGCGAAGAAAAGTTACTGGTGTATGAGTACATGCCAAACAAAAGTTTGGACCGCTTTCTATTTGATCCAGTCAAGCAAACAATACTAGATTGTACAAAACGTTTTGAAATCATCGAGGGAATTGCAAGAGGACTACTTTATCTGCACCGTGATTCACGGCTTAGAATAATCCATCGTGATCTAAAAGCAAGCAACATTTTGTTGGATGAAAATATGAATCCAAAAATTTCAGACTTTGGCTTGGCAAGGATATTCGGGGGAAACCAAAATGAAGAGAATACAGCGAGAGTTGTTGGTACATATGGATATATGTCTCCAGAATATGCAATGGAAGGTCTATTTTCGGTCAAATCTGATGTCTATAGTTTTGGCGTACTACTACTAGAGATTTTGAGTGGTCGCAAAAACACCAGCTTTCGTGATTCTTATGATCCAAGTCTCATAGGATATGCATGGCGTCTATGGAACGAAGAGAGAATAATGGAGCTTCTTGATCCTTCGATCCGTGATTCAAGTCCAAAGAGTAAAGCTTTGAGATGCATACACATAGGGATGTTATGTGTGCAAGATTCAGCATCTAATAGACCAAACATGTCATCAGTGGTGTTGATGCTGGAAAGTGAGGCAACAACTCTTCCTTTACCTGTCAAACCTTTGCTTACTTCCATGAGAAGATACGATTATACGGATGAATTTAATACCGAACCCTTTGATTCCACAGTTGATCTCACAGTGACAGGGAGATAA 2514 0.3731 MGKIIGFKVSFFMSLLLFFLCFLCFYPLFLHAANSITQNESIKDGSTLVSDGLKFEMGFFSLNDSSSRYVGIWYHNVTSAYVWVANREKPIKNREGSITIKNDGNLVVIDGENNEIWSSNVSKTPINNSQVVLHDNGNLILSDRVVGKDIWQSFEDPTDTYLPGMKVPASGGNGMGKDATFCSWKSENDPSFGNYSMSVDSEASPQIVIMEGEKRRWRSGYWDGRVFSGVPNMTGSYLFGFRLNTDDKGERYFVYEALNTTDKIRFLISYDGFEKQFRWNENEKKWNVLQSEPFKKCEFYNSCGSFAVCDDSDSSLCKCIKGFEPRDMNGWKNGNWSKGCKRMTPLKSERSSNSSGGEDGFLVQRDLKLPDFAHLVNAVDCEGNCLKNSSCTAYANTIGIGCMVWFGELVDFQRLENYGNTLNIRLADSDLGDGGKKTKIGIILGVVGGLICLGIFVWLLWRFKRKLKVSSTSTSNINGEPSKSPNLLLSAELSGPVGLSPQGSPLNNAEFFNFSIIVIATNNFSEENKLGQGGFGPVYKGKLPGGVEIAVKRLSRQSNQGSDEFKNEMMLIAKLQHRNLVRLLGCSVEGEEKLLVYEYMPNKSLDRFLFDPVKQTILDCTKRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEENTARVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEILSGRKNTSFRDSYDPSLIGYAWRLWNEERIMELLDPSIRDSSPKSKALRCIHIGMLCVQDSASNRPNMSSVVLMLESEATTLPLPVKPLLTSMRRYDYTDEFNTEPFDSTVDLTVTGR* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1817 837 Gene3D Phosphorylase Kinase; domain 1 502 599 - -
Tpr3g1817 837 CDD PAN_AP_plant 354 427 - -
Tpr3g1817 837 Pfam D-mannose binding lectin 81 185 IPR001480 -
Tpr3g1817 837 CDD STKc_IRAK 530 795 - -
Tpr3g1817 837 CDD B_lectin 39 157 IPR001480 -
Tpr3g1817 837 PIRSF SRK 7 835 IPR024171 GO:0004674
Tpr3g1817 837 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 13 835 - -
Tpr3g1817 837 Gene3D Transferase(Phosphotransferase) domain 1 600 801 - -
Tpr3g1817 837 ProSiteProfiles PAN/Apple domain profile. 340 427 IPR003609 -
Tpr3g1817 837 SMART serkin_6 524 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1817 837 Pfam S-locus glycoprotein domain 217 326 IPR000858 GO:0048544
Tpr3g1817 837 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 13 835 - -
Tpr3g1817 837 SMART ntp_6 356 426 IPR003609 -
Tpr3g1817 837 Gene3D - 29 154 IPR036426 -
Tpr3g1817 837 ProSiteProfiles Protein kinase domain profile. 524 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1817 837 ProSiteProfiles Bulb-type lectin domain profile. 33 154 IPR001480 -
Tpr3g1817 837 Pfam PAN-like domain 357 411 IPR003609 -
Tpr3g1817 837 Pfam Protein tyrosine and serine/threonine kinase 527 792 IPR001245 GO:0004672|GO:0006468
Tpr3g1817 837 SUPERFAMILY Protein kinase-like (PK-like) 508 818 IPR011009 -
Tpr3g1817 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Tpr3g1817 837 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 190 IPR036426 -
Tpr3g1817 837 SMART blect_4 39 157 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1817 Tpr-Chr3 16277086 16281355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1817 512 807 Receptor kinase-like Gene Family AT4G23230 62.626 1.77e-129 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g1817 PK_Tyr_Ser-Thr 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1817 - - mtr:MTR_4g091570 1368.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1817 3 16277086 16281355 Tpr2g2486 2 29805878 29809703 PCT
Tpr2g2484 2 29792899 29797738 Tpr3g1817 3 16277086 16281355 PCT