Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1813 ATGATGCGGCAATTAAACCAAGATTCCTCTGAAGAAGAGAATGGTACTCAAAGCAGCACACATCCAAATCTACCATTTTTCAGCTTTAAAATGATAATGACAGCGACAAGAAATTGTGGTCATGAGAATAAGCTTGGACAAGGTGGATTTGGCTCTGTCTACAAGGGTTGCTTGGTTAATGGACAAGAGATAGCAGTGAAGAGATTATCCAAACACTCAGGTCAAGGCAAAGAAGAATTTAAAAATGAAGTTGCACTTTTAGTTAAACTCCAACACAGAAATCTAGTGAGATTGCTTGGTTGTTGCTTTGAAAAAGAAGAAAGGATGCTAGTTTATGAATACCTACCAAACAAAAGCCTAGACTTCTTTATTTTTGATCAAAACCAAAGGTCATCCTTGGATTGGGGTATACGTTTTGAAATTATTTGTGGGATTGCTCGAGGTGTTTTATATCTTCATCAAGATTCAAGGCTGAAAATAATTCATAGAGATCTAAAAGCCAGCAACATTCTCTTTGATGCTCCAATGAATCCCAAAATTATGGCTAGAATATTTGGAGAAGATGAAATCCAAGCAATAACACAAAAAGTGGTTGATACATTTGGATATATGGCACCAGAATATGCAATGGAAGGACGGTATTCAACGAAAACTGATGTCTTCAGTTATGGGGTCTTAATAATGGAGATTATTGCTGGCAAAAGAAACACACATTGTGGAACAGGAAGAGCTTCTCCAAACTTAATCGGACATGTGTGGACACTATGGACAGAAGGAAAGGCCATGGATATAGTTGATCCGGTACTAAACCAGTCTTATCCTTCTGTTATGGTTCTGAGATGCATTAAAATTGAACTTTTGTGTGTGCAAGAAAACGCCATGAATAGACCATCAATGTTAGAAGTTGTTTTCATGCTATGCAATGAATCACCTCTTTGCCAACCTCAAAAACCAGCATTTTTATTCAATGGCAACCAAGATTTGCAAGATTCATCAACATCAGGAGGAGGATCTTCAATAAATGAAATAACAGAAACTACCATCAGTGCTCGCTAA 1056 0.3722 MMRQLNQDSSEEENGTQSSTHPNLPFFSFKMIMTATRNCGHENKLGQGGFGSVYKGCLVNGQEIAVKRLSKHSGQGKEEFKNEVALLVKLQHRNLVRLLGCCFEKEERMLVYEYLPNKSLDFFIFDQNQRSSLDWGIRFEIICGIARGVLYLHQDSRLKIIHRDLKASNILFDAPMNPKIMARIFGEDEIQAITQKVVDTFGYMAPEYAMEGRYSTKTDVFSYGVLIMEIIAGKRNTHCGTGRASPNLIGHVWTLWTEGKAMDIVDPVLNQSYPSVMVLRCIKIELLCVQENAMNRPSMLEVVFMLCNESPLCQPQKPAFLFNGNQDLQDSSTSGGGSSINEITETTISAR* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1813 351 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 8 344 - -
Tpr3g1813 351 SMART serkin_6 42 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1813 351 MobiDBLite consensus disorder prediction 1 20 - -
Tpr3g1813 351 ProSiteProfiles Protein kinase domain profile. 39 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1813 351 Pfam Protein tyrosine and serine/threonine kinase 42 303 IPR001245 GO:0004672|GO:0006468
Tpr3g1813 351 Gene3D Phosphorylase Kinase; domain 1 2 114 - -
Tpr3g1813 351 ProSitePatterns Protein kinases ATP-binding region signature. 45 67 IPR017441 GO:0005524
Tpr3g1813 351 Gene3D Transferase(Phosphotransferase) domain 1 115 316 - -
Tpr3g1813 351 SUPERFAMILY Protein kinase-like (PK-like) 21 318 IPR011009 -
Tpr3g1813 351 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 8 344 - -
Tpr3g1813 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Tpr3g1813 351 MobiDBLite consensus disorder prediction 330 351 - -
Tpr3g1813 351 CDD STKc_IRAK 45 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1813 Tpr-Chr3 16244735 16247422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1813 27 330 Receptor kinase-like Gene Family AT4G11530 55.806 1.02e-118 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g1813 PK_Tyr_Ser-Thr 3.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1813 - - mtr:MTR_4g091840 607.446