Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1811 ATGGACTCTATTAAAAATCTTTTCTACCTTGTCACAACCCAAAATCCTAAACAAAAGTTGTTAGTATTACATAACTCTTTGATTCTAGTACTTATCACCTTCTATTTTTGCTCTTGTTCTTCTGATACCATATCTACTCACAAACCCATAAGAGATGGTGAGCTTCTGATTTCTAAATCTAAAACGTTTGCTCTCGGATTCTTCTCTCCAGGAAAGTCCACCTCTCGCTATGTAGGAATTTGGTACAACAATTTGCCAATCCAAACTGTTGTTTGGGTTGCAAACAGAGATAATCCGATCAATGACACTTCTGGAATTCTATCTATCAGTCCAAATGGAAACCTAGTACTCCACCGTAACCTTAGTAGCACCGTTCCCATTTGGTCTACCAATGTTTCATTACCACAATCACAAAGAAATAGCACTAGTGTTGTTATAGCTCAACTATCGGATATAGCAAACCTTGTTCTTATGATAAACAACACCAAAACTGTATTATGGGAAAGCTTTGGTCATCCCACAGACACCTTGCTTCCATATCAAAGGCTTGGTTTTGATAGAAAAACAAATCAAAGTTGGTTCCTTCAATCCTGGAAGACAGATGATGACCCTGGAACGGGTGCATTCACAGCAAAATTCAGCACCATTGGCAAACCTCAGTTGTTTATGTACAACCATGATCTTCCTTGGTGGCGTGCTGGACATTGGAACGGTGCATTATTCGTAGGTCTACCTAATTTGAAACGAGATATGGCCATTTCTAACGTTTCTTTCGTTGAATATGACAACTATGTAGCACTCTCATATAACATGTTTGATAAGTCTGTCATTACTAGGATAGTGGTTCAGCAATCTGGTTTCACACAAACATTCTCGTGGGACAATCAAAAGACTCGATGGATCCGGCACTGGTCTGAACCAACAGACCAATGTGATAGCTATGGAACATGTGGATCAAACAGTAATTGTGACTCTTCGAATTTTGACGACTTTAAGTGTACTTGTTTACTTGGTTTTGAACCGAAATTTCCACGTGATTGGTATGAAAGTAGAGATGGGTCAGGAGGGTGTGTAAGAAAGAAAGGTGAATCTGTTTGTGGGAATGGAGAAGGGTTTGTGAAAGTTGTAAGCTTGAAAGTTCCTGATACATCTATGGCAATTGCTAAAGGTGGTTTGAGTTTGGAAGAATGTAAGACAGAATGCTTCAAAAACTGCTCTTGTACGGCCTATGCAGTTGCTGATGTGAAAAATGGTGGAAGTGGATGTTTGACATGGTATGGGGATCTAATGGACATTCAAAAACTTAGTGATCAAGGCCAAGATTTATTTTTACGAGTCGATAAAGTTGAACTTGCCAATTACTACAAAAAAAGCAAAGGATTCCTTGATAAAAAGAGGCTGGCTGCAATTCTGGTAGCTTTTATAGTTTCAGTTGTCCTCCTTCTCTCCTGGGTGTATTGCATGTGGAGGAGAAAAAGAAAGGATAAAATGATGCGGCAATTAAACCAAGATTCCTCTGAAGAAGAGAATGATGCTCAAAGCAACACACATCCAAATCTACCCCTTTTCAGCTATAAAACGATAATGACAGCGACAAGAAATTGTGGTCATGAGAATAAGCTTGGACAAGGTGGATTTGGCTCTGTCTACAAGGGTTGCTTGGTTAATGGACAAGTGATAGCAGTGAAAAGATTGTCCAAAGATTCAGGTCAAGGCAAAGAAGAGTTTAAAAATGAAGTTACACTTTTAGTTAAACTCCAACACAGAAATCTAGTGAGGTTACTTGGTTGTAGCTTTGAAAACGAAGAAAGGATGCTAGTTTACGAATACCTACCAAACAAAAGCTTAGACTTCTTTATATTCGATCAAAACCAAAGGTCTTCATTGGATTGGGTTAAGCGTTTTGATATTATTTGCGGGATTGCGCGAGGTGTTTTATATCTACATCAAGATTCGAGGCTGAAAATAATTCATAGAGATCTAAAAGCCAGCAATGTTCTCCTTGATGCTGCAATGATTCCCAAAATCTCAGATTTTGGTATGGCTAGAATATTTGGAGAAGATGAAATCCAAGCAAGAACAAAAAGATTGGTCGGAACATATGGATATATGTCACCAGAATATGCAATGGAAGGACGGTACTCAACAAAATCTGATGTCTTCAGTTATGGTGTCTTACTACTGGAGATTATTGCTGGCCAAAGAAACACACATTGTGAAATAGGAAGAGCCTCCCCAAATTTAATTGGTCATGTGTGGACACTATGGACAGAAGGAAGGGCATTGGACACAGTTGATTCAACACTAAATCAGTCTTATCCTCCTGCTATAGTTCTGAGATGCATTCAAATTGGACTTTTGTGTGTGCAAGAAAATGCCATGAATAGACCAACAATGTCAGAAGTTGTGTTCATGCTATGCAATGAAACACCTGTTTGCCAACCTCAAAAACCAGCATTCTTATTCAATGGAAACCAAGATTTGCAAGAGTCATCAACATCAGGAGGAGGATCTTCGATAATTGAATTAACAGAAACTACCATCAGTGCTCGCTAA 2556 0.3877 MDSIKNLFYLVTTQNPKQKLLVLHNSLILVLITFYFCSCSSDTISTHKPIRDGELLISKSKTFALGFFSPGKSTSRYVGIWYNNLPIQTVVWVANRDNPINDTSGILSISPNGNLVLHRNLSSTVPIWSTNVSLPQSQRNSTSVVIAQLSDIANLVLMINNTKTVLWESFGHPTDTLLPYQRLGFDRKTNQSWFLQSWKTDDDPGTGAFTAKFSTIGKPQLFMYNHDLPWWRAGHWNGALFVGLPNLKRDMAISNVSFVEYDNYVALSYNMFDKSVITRIVVQQSGFTQTFSWDNQKTRWIRHWSEPTDQCDSYGTCGSNSNCDSSNFDDFKCTCLLGFEPKFPRDWYESRDGSGGCVRKKGESVCGNGEGFVKVVSLKVPDTSMAIAKGGLSLEECKTECFKNCSCTAYAVADVKNGGSGCLTWYGDLMDIQKLSDQGQDLFLRVDKVELANYYKKSKGFLDKKRLAAILVAFIVSVVLLLSWVYCMWRRKRKDKMMRQLNQDSSEEENDAQSNTHPNLPLFSYKTIMTATRNCGHENKLGQGGFGSVYKGCLVNGQVIAVKRLSKDSGQGKEEFKNEVTLLVKLQHRNLVRLLGCSFENEERMLVYEYLPNKSLDFFIFDQNQRSSLDWVKRFDIICGIARGVLYLHQDSRLKIIHRDLKASNVLLDAAMIPKISDFGMARIFGEDEIQARTKRLVGTYGYMSPEYAMEGRYSTKSDVFSYGVLLLEIIAGQRNTHCEIGRASPNLIGHVWTLWTEGRALDTVDSTLNQSYPPAIVLRCIQIGLLCVQENAMNRPTMSEVVFMLCNETPVCQPQKPAFLFNGNQDLQESSTSGGGSSIIELTETTISAR* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1811 851 Pfam Protein tyrosine and serine/threonine kinase 538 804 IPR001245 GO:0004672|GO:0006468
Tpr3g1811 851 SMART blect_4 47 173 IPR001480 -
Tpr3g1811 851 SUPERFAMILY alpha-D-mannose-specific plant lectins 90 204 IPR036426 -
Tpr3g1811 851 Pfam S-locus glycoprotein domain 231 343 IPR000858 GO:0048544
Tpr3g1811 851 Pfam D-mannose binding lectin 89 199 IPR001480 -
Tpr3g1811 851 PANTHER - 28 848 - -
Tpr3g1811 851 SUPERFAMILY Protein kinase-like (PK-like) 516 817 IPR011009 -
Tpr3g1811 851 ProSiteProfiles Protein kinase domain profile. 535 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1811 851 ProSiteProfiles Bulb-type lectin domain profile. 41 170 IPR001480 -
Tpr3g1811 851 ProSiteProfiles EGF-like domain profile. 307 345 IPR000742 -
Tpr3g1811 851 Gene3D Phosphorylase Kinase; domain 1 494 610 - -
Tpr3g1811 851 Gene3D Transferase(Phosphotransferase) domain 1 611 816 - -
Tpr3g1811 851 Pfam PAN-like domain 366 432 IPR003609 -
Tpr3g1811 851 ProSiteProfiles PAN/Apple domain profile. 366 447 IPR003609 -
Tpr3g1811 851 ProSitePatterns Protein kinases ATP-binding region signature. 541 563 IPR017441 GO:0005524
Tpr3g1811 851 CDD PAN_AP_plant 367 446 - -
Tpr3g1811 851 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 28 848 - -
Tpr3g1811 851 Gene3D - 35 171 IPR036426 -
Tpr3g1811 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672|GO:0006468
Tpr3g1811 851 Gene3D Hepatocyte Growth Factor 364 444 - -
Tpr3g1811 851 CDD STKc_IRAK 541 808 - -
Tpr3g1811 851 CDD B_lectin 49 173 IPR001480 -
Tpr3g1811 851 SMART serkin_6 538 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1811 851 SMART ntp_6 367 446 IPR003609 -
Tpr3g1811 851 PIRSF SRK 14 851 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1811 Tpr-Chr3 16211833 16217591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1811 523 847 Receptor kinase-like Gene Family AT4G11530 55.352 3.18e-118 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g1811 PK_Tyr_Ser-Thr 6.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1811 - - mtr:MTR_4g091840 1410.2