Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1810 ATGAAATCTGCTAAAAATGTTATCTACCTTGTCACAGCCAAAATTGATAAACACAAGTTGTTAGTGTTACATAACAATTGGCTGCTAATTATTTCTTTGATTATACTTCTAACCTTCTCTTTTTGCTCTTGTTCTTCTGATACCATATCCTCTGACAAACCTATAAGAGATGGTGAGCTTCTGATTTCTAAATCTAAAACTTTTTCTCTTGGATTCTTCACTCCAGGAAATTCCACGTCTCGCTATGTTGGAATTTGGTACAACAATTTGCCAATCCAAACTGTTGTTTGGGTTGCAAACAGAGATAGTCCAATCAACGACACTTCTGGAATCCTATCAATCGACCGAAATGGAAATCTAGTACTCAACCACAACCTAAGCACTATTCCCATTTGGTCAACCAACGTTTCGTTACAACAATATCGAAGAAATGGCACCAGCGTTATAGCTCAACTGACGGATATAGCAAACCTTGTTATCGTACTAAAAACCACCAAAAATGTCATATGGGAAAGCTTTGATTATCCCACAGACACTTTTCTTCCATATCAAAGACTTGGTTTTGATAGAAAAACTAATCAAAGTTGGTTCCTTCAATCCTGGAAGACAAATGATGACCCTGGAAAAGGCGCCTTCACGTTGACATTCAGCACCATTGGTAAACCTCAATTTTTTATGTACAACAATGACCTTCCTTGGTGGCGTGGTGGACCTTGGATTGGATCAATATTAGCAGGTGTACCTAGTGTGAAACGAGAAAGGGCCACTTTTAACGTTTCTTTTGTCGAAGATGACAACAATGTAGCACTCACATATAACATATTTTATAAGTCTGTCATCACTAGAATTGTGGTTCAGGAATCTGGTTTCTTTCAAACACTCACGTGGGACAATCAAAAGAATCGATGGAACCAGTTCTTTTCAGAACCAGTAAACCAATGTGATAGCTATGGAATTTGTGGATCGAACAGTAATTGTGACCCTTTAAACTTTAAAGATTTTAAGTGTACTTGTTTACCTGGTTTTGAACCCAAATTTCCACTTGATTGGTATGATAGTGGAGATGGGTCAGGAGGCTGCGTAAGGAAGAAAGGTGCATCTGTTTGCGGAAACGGGGAAGGTTTTATCAAAGTTTCTATTTTTGATAAAATGATGCTGCAATTACACCAAGATTCCTCTGGAAAAGTGAATGTTGCTCAAAGCAACATACATCCAAATCTACCCTTTTTTAGCTTTAAAACGATAATGACAGCTACAAGAAATTGTGATCATGAGCATAAGCTTGGACAAGGTGGATTTGGCTCTGTCTATAAGGGTTGCTTGGTTAATGGACAAGAGATAGCAGTTAAAAGATTGTCAAGAAATTCAGGTCAAGGCAAAGAAGAGTTTAAAAATGAAGTTACACTTTTAATTAAACTCCAACACAGAAATCTAGTGAGGTTGCTCGGTTGTTGCTTTGAAAAAGAAGAAAGAATGTTAGTTTATGAATACCTCCCAAACAAAAGCCTAGACTTCTTTATATTCGATAAAAACCAAAGGTCATCATTGGATTGGGGTAAGCGTTTTGAAATTATTTGTGGTATTGCTCGAGGTGTATTATATCTTCATCAAGATTCAAGGTTGAAAATAATTCATAGAGATCTAAAAGCCAGCAATGTTCTCCTTGATGCTGCAATGGATCCCAAAATCTCAGATTTTGGTATGGCTAGAATATTTGGAGATGATGAAATCCAAGCTAGAACAAAAAGAGTGGTTGGAACATAG 1764 0.3707 MKSAKNVIYLVTAKIDKHKLLVLHNNWLLIISLIILLTFSFCSCSSDTISSDKPIRDGELLISKSKTFSLGFFTPGNSTSRYVGIWYNNLPIQTVVWVANRDSPINDTSGILSIDRNGNLVLNHNLSTIPIWSTNVSLQQYRRNGTSVIAQLTDIANLVIVLKTTKNVIWESFDYPTDTFLPYQRLGFDRKTNQSWFLQSWKTNDDPGKGAFTLTFSTIGKPQFFMYNNDLPWWRGGPWIGSILAGVPSVKRERATFNVSFVEDDNNVALTYNIFYKSVITRIVVQESGFFQTLTWDNQKNRWNQFFSEPVNQCDSYGICGSNSNCDPLNFKDFKCTCLPGFEPKFPLDWYDSGDGSGGCVRKKGASVCGNGEGFIKVSIFDKMMLQLHQDSSGKVNVAQSNIHPNLPFFSFKTIMTATRNCDHEHKLGQGGFGSVYKGCLVNGQEIAVKRLSRNSGQGKEEFKNEVTLLIKLQHRNLVRLLGCCFEKEERMLVYEYLPNKSLDFFIFDKNQRSSLDWGKRFEIICGIARGVLYLHQDSRLKIIHRDLKASNVLLDAAMDPKISDFGMARIFGDDEIQARTKRVVGT* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1810 587 SUPERFAMILY alpha-D-mannose-specific plant lectins 95 207 IPR036426 -
Tpr3g1810 587 ProSiteProfiles Protein kinase domain profile. 422 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1810 587 CDD EGF_CA 311 345 - -
Tpr3g1810 587 Pfam Protein tyrosine and serine/threonine kinase 425 580 IPR001245 GO:0004672|GO:0006468
Tpr3g1810 587 Gene3D - 39 173 IPR036426 -
Tpr3g1810 587 ProSiteProfiles EGF-like domain profile. 310 348 IPR000742 -
Tpr3g1810 587 PANTHER - 389 587 - -
Tpr3g1810 587 PANTHER - 28 379 - -
Tpr3g1810 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
Tpr3g1810 587 SUPERFAMILY Protein kinase-like (PK-like) 402 587 IPR011009 -
Tpr3g1810 587 ProSiteProfiles Bulb-type lectin domain profile. 46 173 IPR001480 -
Tpr3g1810 587 Pfam S-locus glycoprotein domain 234 346 IPR000858 GO:0048544
Tpr3g1810 587 Gene3D Transferase(Phosphotransferase) domain 1 498 587 - -
Tpr3g1810 587 CDD B_lectin 52 176 IPR001480 -
Tpr3g1810 587 SMART serkin_6 422 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1810 587 SMART blect_4 52 176 IPR001480 -
Tpr3g1810 587 Gene3D Phosphorylase Kinase; domain 1 396 497 - -
Tpr3g1810 587 ProSitePatterns Protein kinases ATP-binding region signature. 428 450 IPR017441 GO:0005524
Tpr3g1810 587 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 389 587 - -
Tpr3g1810 587 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 28 379 - -
Tpr3g1810 587 Pfam D-mannose binding lectin 94 202 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1810 Tpr-Chr3 16200423 16203126 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1810 410 587 Receptor kinase-like Gene Family AT4G23130 65.730 2.13e-76 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g1810 PK_Tyr_Ser-Thr 1.2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1810 - - mtr:MTR_4g091800 636.721