Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1803 ATGACCAAAGATAGCGTTATTACAGATGCTATTACTTATACCAAGAGGCTTCAATATGAAGTTGACACTCTCACACAAGAGCTTCATGCATTGGAAGAAAAAGAAAACTTAGAGGAAAGAGCAGAGCCAAAAATAGCTGAATTTTCTGCTGCTGAAGATTTGAACAACTGGGGGATACAGGAAGAAGTTCAAGTAGAAAATATTGGTGAAAATAAGCTCTGGATTAAGATAATCATTGAGAAAAATACAGGGAGGTTCATGAAATTAATGGAGACTATGAATAGTTTAGGCATTGAAATCATAGAAGCCAATGTTACAACCATAAAAGGAGCATATTTGATTGTAACTTCTATTAAGGGTATCAGTTTTGATGTTCATCAAGCAAAACATTTGTTGGCAGATATAATCAAAAGTATTTAG 420 0.3381 MTKDSVITDAITYTKRLQYEVDTLTQELHALEEKENLEERAEPKIAEFSAAEDLNNWGIQEEVQVENIGENKLWIKIIIEKNTGRFMKLMETMNSLGIEIIEANVTTIKGAYLIVTSIKGISFDVHQAKHLLADIIKSI* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1803 139 PANTHER TRANSCRIPTION FACTOR DYT1 1 139 - -
Tpr3g1803 139 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 139 - -
Tpr3g1803 139 Coils Coil 14 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1803 Tpr-Chr3 16129836 16130652 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1803 1 138 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 43.448 1.28e-27 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1803 - - gmx:100806159 144.05