Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1794 ATGATGGCTTCTCGGAACCAGAACAAGCCTCCTCACAGCCACTCCAACAAAAAGATTGGTGCTGAAGAGATGGAGAGACAAGGAGTGGTTGGGAGAGCTAGAGCGCCATTATCTGCTGTAGTGAACAACGCAGAGGGAACCGATTCTAACACCATCGAGTTCACAAAAGAGGATATCGAGGCATTGCTTATTGAGAAGATGAAAAAGGGGATTCCGTATGATAATAAGAAAAAAATGGACCAGATGGTGGATCTTATTAAGCGGCTTAAGCTTTGTGTTCGGTGGTGTGTCGATGAAAATGATAAACTTCACTCTGAAGTAGAGTCTGCTGCTAAAAAGTGCTGTGATACTGAGATGGAGATGAAAAATAAGACTGATGAGCTGAATGATACTATATCTGATATGAGGAGGACAATTTCTTCCTTAGAAGAGATAAATGTAAAAGAAAAGTTGGAAAAGTCGGAGGCTTGTAGACGACTTGAAGTTGAGAAATCTATCATAGTTGAGAGCCTTAATGCTACAAAAGAGCTTAATAAGGAGTTGCAGGATCGATTGAAATCTCTTAAAGATTCACAGAGTGAAGCTATAAAGCATAAAGAAATGCTAGAAAATGAACTCACATGCCTCCGCGAAGAACTAAAAAAAATTACAGAAGATCGTGATCGCATACAAGGACAACTAAATGCTGTTTTTTTAGAACAGGAAAAATACATAAAAATTAAATACGAAACATTAACAAAATTGAATAAATTGGCAATTAAAACAGAGGCTCTCGAGGAGACTTGTTCCTCTCAAAAGGAGACAATAACTACACTGGAGCAAACATTACGTTCTGAAAGGGAGAAGTCAGAGATGGCTGATTTATCTGCTTTGCAAACAAGAACAATGCTTGAAGAGCAGAAAAGAATCATACGAGAGCTACGAGATCAGTTGACAGATAAAGAATTTCAAGTAGTCGAAGGAGAAAAACTAAGGAAAAAACTGCACAACACTGTCTTGGAGCTGAAAGGAAATATTCGCGTGTTTTGTCGTGTGCGACCTTTACTACGAGAGGATCGTTCCGAAACGGACATGGCTGTTTCTTACCCAACATCAATGGAAATGCTTGGCCGGGGCATCGAGTTGGTGCAAAATGGACAGAAACAGCTTTTTACATTTGACAAGGTGTTTAATCATGGCGCCTCTCAGCAGGAAGTTTTCACTGAAATATCACAACTGGTGCAAAGTGCGCTTGATGGTTACAAGGTATGCATTTTTGCTTACGGACAAACAGGTTCAGGAAAAACCTATACAATGATGGGTAGGCCTGATGCTCCAGATCTGAAAGGGATGATACCACTTTCTTTAGAACAGATATTCCAGACTAGTCAATCCCTTAAAGACCAGGGCTGGAATTTCAAAATGCAGGCATCAGTATTGGAAATATATAACGAGACTATCAAGGATTTGTTATTATCAAATCGGTCAAGTGGGTTTGACCAAACACGAGCAGAAAATAGTGTTCACGGAAAACAGTACACTATTAGACATGACAAAAATGGAAACACGCATGTTTTGGACCTCACCATTGTCGATGTTTGTAGTGTCGATGAGATTTCCTCCCTCCTGCAAAAGGCTGCTCAAATCAGGTCAATGGGAAGAACACAAATGAATGAACAATCATCAAGAAGCCACTTTGTCGTTACTTTGCGCATATGTGGTACAAATGAGAACACTGAACAACAAGTACAAGGTGTCTTAAACCTGATTGATTTGGCTGGAAGTGAAAGACTTTCAAGGAGTGGGGCCACTGGAGACCGTTTGAAGGAAACTCAGGCTATCAACCAAAGTCTCTCCTCTTTAAGTAATGTCATATTTGCTTTGGCAAAAAAAGAAGAGCATGTTCCTTTCAGGGATTCAAAACTGACGCACCTACTCCAGCCATGTCTTGAAGGGGATTCCAAAACTTTGATGTTTGTCAACATATCACCTGATCAATCTTCAATTGATGAGTCACTTTGTTCACTCCGCTTTGCAGCTAGAGTTAATGCTGTGAAATTGGGGTTTCAAGGTGTGAGACCTAGACATATACATGGTGCTTAG 2082 0.4025 MMASRNQNKPPHSHSNKKIGAEEMERQGVVGRARAPLSAVVNNAEGTDSNTIEFTKEDIEALLIEKMKKGIPYDNKKKMDQMVDLIKRLKLCVRWCVDENDKLHSEVESAAKKCCDTEMEMKNKTDELNDTISDMRRTISSLEEINVKEKLEKSEACRRLEVEKSIIVESLNATKELNKELQDRLKSLKDSQSEAIKHKEMLENELTCLREELKKITEDRDRIQGQLNAVFLEQEKYIKIKYETLTKLNKLAIKTEALEETCSSQKETITTLEQTLRSEREKSEMADLSALQTRTMLEEQKRIIRELRDQLTDKEFQVVEGEKLRKKLHNTVLELKGNIRVFCRVRPLLREDRSETDMAVSYPTSMEMLGRGIELVQNGQKQLFTFDKVFNHGASQQEVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDAPDLKGMIPLSLEQIFQTSQSLKDQGWNFKMQASVLEIYNETIKDLLLSNRSSGFDQTRAENSVHGKQYTIRHDKNGNTHVLDLTIVDVCSVDEISSLLQKAAQIRSMGRTQMNEQSSRSHFVVTLRICGTNENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINQSLSSLSNVIFALAKKEEHVPFRDSKLTHLLQPCLEGDSKTLMFVNISPDQSSIDESLCSLRFAARVNAVKLGFQGVRPRHIHGA* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1794 693 PRINTS Kinesin heavy chain signature 413 434 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g1794 693 PRINTS Kinesin heavy chain signature 548 565 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g1794 693 PRINTS Kinesin heavy chain signature 579 597 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g1794 693 PRINTS Kinesin heavy chain signature 628 649 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g1794 693 Coils Coil 290 317 - -
Tpr3g1794 693 Coils Coil 171 226 - -
Tpr3g1794 693 CDD KISc_C_terminal 336 680 - -
Tpr3g1794 693 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 298 677 IPR027417 -
Tpr3g1794 693 PANTHER KINESIN-LIKE PROTEIN 153 682 - -
Tpr3g1794 693 PANTHER KINESIN-LIKE PROTEIN 28 156 - -
Tpr3g1794 693 MobiDBLite consensus disorder prediction 1 21 - -
Tpr3g1794 693 Gene3D Kinesin motor domain 233 680 IPR036961 -
Tpr3g1794 693 SMART kinesin_4 336 686 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g1794 693 Pfam Kinesin motor domain 344 677 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g1794 693 ProSiteProfiles Kinesin motor domain profile. 338 678 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g1794 693 ProSitePatterns Kinesin motor domain signature. 578 589 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tpr3g1794 693 PANTHER KINESIN-LIKE PROTEIN KLP-3 28 156 - -
Tpr3g1794 693 PANTHER KINESIN-LIKE PROTEIN KLP-3 153 682 - -
Tpr3g1794 693 Coils Coil 125 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1794 Tpr-Chr3 15999005 16014727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1794 231 678 Calmodulin-binding Proteins AT5G65930 34.924 2.17e-77 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1794 K10405 - gmx:100818473 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1794 3 15999005 16014727 Tpr2g2505 2 29959807 29965793 PCT