Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1753 ATGGCTTTTCAAATAAAAAGGGATTTTCTATTCCAAATATTCTTGTTCCTCAGTATGTTAATGGCTGGTCAGAGTACCGATACTGATATCTTGTGTTTAAAATCCATTAAGAATTCCTTGGAAGACCCAAACAATTACTTTCAAAATTGGAACTTCAACAACAAAACCGAAGGTTTCATATGTTGGTTTACTGGTGTTGAATGCTGGCATCCTGATGAAAATAGAGTACTAAATCTCAAACTATCTAACATGGGATTGAAGGGCCAGTTTCCGCGTGGTCTTCAATACTGCTCTTCAATTACGGGCGTAGACCTTTCTCTCAACGAGCTCTCAGGACCCATCCCATCTGATATGTCAACCATACTCAAATATGTTACTGCCATGGATATCTCTGGTAACAAATTCACTGGTGAAATTCCGATAGATTTTGCAAACTGCACTTACCTGAATTCTCTTAAGCTTGACCGCAACATGTTAAGCGGTCATATCCCCCAAGAATTTTCCCTGCTTAATAGGCTTAAAGTGTTTGATTTTTCTGACAATGATTTGTCAGGGCCAGTGCCGATGTTCCAAAGAGGAGTAGTTTCTAATTATGCTAATAATTATAAACTTTGTGGAGGAGTGTCTTTGGCACCATGCTCCGGTGACAAGTTCCATCAAGCATTAAAGGGTGGCCTCATTGTTGGTTTTGCATTATCATTGACTTGTTATATTGTGGTTACTTATTACATCTCCTACTCCAGTTCTGTACCTCATGTGCAATTGAAGAAGAAGAAGTACAGAAACAGCCACCTAAACAAGGTTAAAGAGCTAGGAAAATATATTTCCTCCATCACAAGCAAGGGGACACAAAGCATAGCTAATCATATGCACGAATTGCTACATCCGCAGCTGGTGGAGAAAGGAAGCAAAGAGATCTCTATGCTAATGGAGAGACTGACTTCAACAATATGGTTGGAAGAACTGCGCGACGCAACTGATTGTTTCGCCATGGACAATGCCATTGGGGTAGGAAAGATGGGAATGATGTACCAAGGATTTCTGCCTAATGGTCAGTTACTAGCTGTTAAGAGACTATTTGACTCTCGGTCATTTAAACGTCAATTCCTTTTGGAAACAGCGATTTTGTGCAAGTACAGACACAAAAATATAGTTCCCCTGCTTGGGTTTTGCATTGAAGAGAAGGAAAGGCTTTTGGCATATGCATACATGTCAAATGGAAGGCTTTCCAAATGGTTACATCCTTTGGAAAGTGAAGTCATAAGATTGAAATGGCATGATAGGATCAAAATTGCACTTGGAATAGCAAGAGGCTTAGCATGGCTACATCATACATGTGATTTTGGCATTGTGCATTTTAATATATGTTCACAATGCATATTGCTAGATGATAATTTTGAACCCAAAATATCCAATTTTGGAGAGGCCAAATTTATGAATCCCAACATTGAAGATCATCTAGGGGTGATATTTAAAGTGAATGATGGGAAGAAGGATGTTTATGACTTTGGAAGTGTGCTTTTAGAATTGATTACAGGAAAAACATATAATGAATTATCACGTTCATATGACACTTATAATCTTTGCAGTAACCCTTTGAGTTTTTATAATGTAATTGATAAATCTGTGACTGGAGAAGGACTTGAAAATGAAGTTTGTACTCTCCTAAAGATTGCTTGTGAGTGTGTTCACCCTTTCCCTGACCAAAGGCCAACAATGCTTGAAGTTTACAACAATATGAAAAATGTAAGGATGGATCGAAACGATTATGGTGGTGAAGAGTCAGACACATTAAGGGGATTATAA 1806 0.3826 MAFQIKRDFLFQIFLFLSMLMAGQSTDTDILCLKSIKNSLEDPNNYFQNWNFNNKTEGFICWFTGVECWHPDENRVLNLKLSNMGLKGQFPRGLQYCSSITGVDLSLNELSGPIPSDMSTILKYVTAMDISGNKFTGEIPIDFANCTYLNSLKLDRNMLSGHIPQEFSLLNRLKVFDFSDNDLSGPVPMFQRGVVSNYANNYKLCGGVSLAPCSGDKFHQALKGGLIVGFALSLTCYIVVTYYISYSSSVPHVQLKKKKYRNSHLNKVKELGKYISSITSKGTQSIANHMHELLHPQLVEKGSKEISMLMERLTSTIWLEELRDATDCFAMDNAIGVGKMGMMYQGFLPNGQLLAVKRLFDSRSFKRQFLLETAILCKYRHKNIVPLLGFCIEEKERLLAYAYMSNGRLSKWLHPLESEVIRLKWHDRIKIALGIARGLAWLHHTCDFGIVHFNICSQCILLDDNFEPKISNFGEAKFMNPNIEDHLGVIFKVNDGKKDVYDFGSVLLELITGKTYNELSRSYDTYNLCSNPLSFYNVIDKSVTGEGLENEVCTLLKIACECVHPFPDQRPTMLEVYNNMKNVRMDRNDYGGEESDTLRGL* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1753 601 PANTHER RECEPTOR-LIKE PROTEIN 55 13 583 - -
Tpr3g1753 601 SUPERFAMILY L domain-like 27 191 - -
Tpr3g1753 601 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 13 583 - -
Tpr3g1753 601 Gene3D Transferase(Phosphotransferase) domain 1 404 597 - -
Tpr3g1753 601 ProSiteProfiles Protein kinase domain profile. 329 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1753 601 SUPERFAMILY Protein kinase-like (PK-like) 307 578 IPR011009 -
Tpr3g1753 601 Pfam Leucine rich repeat N-terminal domain 27 69 IPR013210 -
Tpr3g1753 601 Pfam Protein tyrosine and serine/threonine kinase 331 579 IPR001245 GO:0004672|GO:0006468
Tpr3g1753 601 Gene3D Phosphorylase Kinase; domain 1 263 403 - -
Tpr3g1753 601 Coils Coil 598 601 - -
Tpr3g1753 601 Gene3D Ribonuclease Inhibitor 26 215 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1753 Tpr-Chr3 15504143 15507176 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1753 11 596 Receptor kinase-like Gene Family AT3G28450 35.621 2.33e-110 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Tpr3g1753 PK_Tyr_Ser-Thr 5.6e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1753 - - mtr:MTR_4g092520 846.654