Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1752 ATGCATATTACTGGCCACATGATCTTTCTAGTAACGACTTCTCTGTTTTTGTATCTGCACGGAATGGCTGTCCAAATAAAAAGGAATATTCTCTTGCATACCTTCTTTTTGTGCTCTTTGCTCAGTATCTTAAAGATAAGTCATGGAACTGAGACTGATATCTTGTGTTTAAAATCTATTAAGAATTCCTTGGAAGACCCAAATAATTACTTAACCTCGAGCTGGAACCTCAACAACAATACCGAAGGTTTCATATGTGATTTCGATGGTGTTGAATGTTGGCATCCTGATGAGAATAGAGTACTAAATCTCAAACTATCGAACATGGGATTGAAGGGCCAGTTTCCGCGGGGAATTGTGAATTGCACTTCGTTGACAGGATTAGACCTTTCAGTCAACGACCTTTCAGGACCCATTCCATCTGATATATCAGAAATACTCAGATTTGTTACCACCATTGATCTCTCTGCTAACAGATTCACCGGTGAAATTCCAACAGCTTTAGCAAATTGCACATACCTGAATACTCTTAAACTTGACGACAATATGCTAACAGGTGAAATTCCAAAAGAGTTTGCCTCGCTTATCAGGCTAAAAACTATTGATTTTGCTGACAATCAATTGTATGGGGAAGTGCCAAATTTCGACAGCGTTGTAAAAGTTAACTATGCTAACAATAGAGGACTTTGTGGAGGGTCTTTGAGACCTTGCTCCTCGACACGCGACAAGCAAGACGATTTCCATCAATCATTCAAAGGTGGTCTTATTATTGGTTATGTTTTTTCATTCATTTTTTCTGTTATGGTCACTTGTATGTTCTACTCCAAATGTGCACATTGGGTGCATCAATTGAAAAAGAGAAAAAACATTCCCCTAAACAAAGCTAAAGAATTGGGCAAATATGTTTGCTCCATCGCAAGCAGGAGGACACGGATGGTAGTTAATCAGATGCATGAACTGTTAAATTCACAGATGGTACACAACGAAAGAAAAGAGATCTCTGTACTATTGGAAAGACTGATATCAACAATATGGTTAGAAGAACTGCGTGATGCAACTGACTGTTTCGCTATGGACAATGCCATCGGCGTGGGAAAGATGGGAATGATGTACCAAGCGACTCTATCTAATGGTCAGTTACTAGCTGTTAAGAGACTATTTGACTCTGAGTTGTTTAAAAGGCAGTTCCTTTTAGAAACAATGATTATGGGTAGGTACATCCACAACAATATAGTTCCCCTGCTCGGGTTCTTCATTGAAGGAAAGGAAAGGCTTTTGGCATACCCATACATGTCAAATGGGAGGCTTTCCAAATGGTTGCATCCTTTGGAAAGTGAAGTCATAAGATTGAAATGGCATGATAGGATCAACATTGCACTTGGAATAGCAAGAGGATTATCATGGCTACATCATACATGTGATTTGGGCATAGTGCATTTTAACATATGTTCAGAATGCGTATTGCTAGATGAAAATTTTGAACCCAAAATATCCAATTTTGGAGAGGCCAAATTTATGAATCCCAACATTGAAGATCATCTAGGCACGATGTTTAAAGTGAATGACGGGAAGAAGGATGTCTATGACTTTGGTAGTGTGCTTTTTGAATTGATGACGGGGAAAACATATAATGAATTGTCGCGATCGTATGACACTTCTGATTTATGTGCCAACCCTTTGAGTTTCTATAATGTAATTGATAAATCTGTGACAGGGGAAGGGCTTGAAAATGAAGTTTGTACTCTCCTAAAGATTGCTTGCGAGTGTGTTAAGCCTTTACCAGACCAAAGGCCAACAATGCTTGAAGTTTACAACAATATGAGCAATGTAAGGAAGGGGCAAAATGACTCTGTTAATGATTCTGACACATTAAGGGGAGTAGAATATGCTTCCTCTATTACTATAGACGAAATTGTTGAGTTTTAA 1926 0.3853 MHITGHMIFLVTTSLFLYLHGMAVQIKRNILLHTFFLCSLLSILKISHGTETDILCLKSIKNSLEDPNNYLTSSWNLNNNTEGFICDFDGVECWHPDENRVLNLKLSNMGLKGQFPRGIVNCTSLTGLDLSVNDLSGPIPSDISEILRFVTTIDLSANRFTGEIPTALANCTYLNTLKLDDNMLTGEIPKEFASLIRLKTIDFADNQLYGEVPNFDSVVKVNYANNRGLCGGSLRPCSSTRDKQDDFHQSFKGGLIIGYVFSFIFSVMVTCMFYSKCAHWVHQLKKRKNIPLNKAKELGKYVCSIASRRTRMVVNQMHELLNSQMVHNERKEISVLLERLISTIWLEELRDATDCFAMDNAIGVGKMGMMYQATLSNGQLLAVKRLFDSELFKRQFLLETMIMGRYIHNNIVPLLGFFIEGKERLLAYPYMSNGRLSKWLHPLESEVIRLKWHDRINIALGIARGLSWLHHTCDLGIVHFNICSECVLLDENFEPKISNFGEAKFMNPNIEDHLGTMFKVNDGKKDVYDFGSVLFELMTGKTYNELSRSYDTSDLCANPLSFYNVIDKSVTGEGLENEVCTLLKIACECVKPLPDQRPTMLEVYNNMSNVRKGQNDSVNDSDTLRGVEYASSITIDEIVEF* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1752 641 Pfam Leucine rich repeat N-terminal domain 52 94 IPR013210 -
Tpr3g1752 641 SUPERFAMILY Protein kinase-like (PK-like) 337 605 IPR011009 -
Tpr3g1752 641 ProSiteProfiles Protein kinase domain profile. 356 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1752 641 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 28 610 - -
Tpr3g1752 641 Pfam Protein kinase domain 359 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g1752 641 PANTHER RECEPTOR-LIKE PROTEIN 55 28 610 - -
Tpr3g1752 641 SUPERFAMILY L domain-like 50 216 - -
Tpr3g1752 641 Gene3D Phosphorylase Kinase; domain 1 315 430 - -
Tpr3g1752 641 Gene3D Ribonuclease Inhibitor 50 239 IPR032675 -
Tpr3g1752 641 Gene3D Transferase(Phosphotransferase) domain 1 431 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1752 Tpr-Chr3 15499756 15502585 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1752 31 622 Receptor kinase-like Gene Family AT3G28450 33.708 4.90e-101 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Tpr3g1752 Pkinase 1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1752 - - mtr:MTR_4g092520 808.135