Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1748 ATGGAATTCTCTGAACAATTCAAAGATTCATTTAGACAAGGTCTTATTGCTGGCTATATTTTCACAGCAACTTTTGCCATTGTTTTTTATATGTTCTATTGTCTACCCACACAAATTATCAAGTTAAGGAAAAATAAGAACCTTAGACATAAGAAAACAAGAGAGGTGAGCAAATTCCCTAAGAAGGACTTGAAACAAGAAAAGATCAAAGAGAAACTAAAGAAAGTAAGACAAAAAGAAAAAATGTTGCCTGTGGAGTTGCTAGAGAAAAGAATACAGATCAATAAAGTTGGACGGTTGACTTATAGAATAAACTTCACAAAACTTTGTCATGCAACAAACTACTTTAGTAAGGACAATGTCATTGGCGTAGGAGTGTTTGGGATAATGTACAAAGCAACATTTCCCAAGAATTGTTTCTTGGCAGTTAAGAAACTACATGATTCTCAATTTTGTATCAAAAGGTTTGAGCTAGAAATAATGATTTTGGGACAATATAGTCACCAAAACATACTTCCCTTGATTGGATTTTGCATAGAAGAAGAAAAAAATGAAAGAATTTTGGTGTATGAATACATGTCAAATGGAAGACTTTCTGATTGGTTGAATGATGATACTACAAAATTAGGATGGACAAGGGTTATTAAAATTGCACTTGGTGTAGCAAGAGGTTTATGTTGTCTTCATCATAGTTTGCATATGGTTCATCTTAGTATAAGCTTAGAGTGTATCTTGTTAGGGGATGATTTCGAGCCGAAAATATCCAATTTTGGAGGGGCCATGTTTATGAATAATGATTTGAACAAAAGCATAAGATTTGAGAAGAAGGATGTTTATGACTTTGGTTGTTTTCTTTTTGAGTTGATTAAGGGGAATAAATTTGGCCAAAGACATGATTGTTTAGGCAATAATAATGTTCCGTTCGCGACGTACACATATCCAAATCATATGAACCTATTGGAGGACCATTTTGGGTTCTATGATGCAATGGATGAAACACTAAACAAGATAGAATTTGAAGATGAGGTATCTGCTCTTCTTAGAGTTGCATGTGATTGTGTTCATCCTATCCATGAAAAAAGGCCTACTATGCTTGAGGTGTACAATAAGATGGGAAGCATATGGGAGAAAGATGAGATTTTTGAAGATCATGACCAATTTGGATTAATGCATAACTCTTAA 1182 0.3376 MEFSEQFKDSFRQGLIAGYIFTATFAIVFYMFYCLPTQIIKLRKNKNLRHKKTREVSKFPKKDLKQEKIKEKLKKVRQKEKMLPVELLEKRIQINKVGRLTYRINFTKLCHATNYFSKDNVIGVGVFGIMYKATFPKNCFLAVKKLHDSQFCIKRFELEIMILGQYSHQNILPLIGFCIEEEKNERILVYEYMSNGRLSDWLNDDTTKLGWTRVIKIALGVARGLCCLHHSLHMVHLSISLECILLGDDFEPKISNFGGAMFMNNDLNKSIRFEKKDVYDFGCFLFELIKGNKFGQRHDCLGNNNVPFATYTYPNHMNLLEDHFGFYDAMDETLNKIEFEDEVSALLRVACDCVHPIHEKRPTMLEVYNKMGSIWEKDEIFEDHDQFGLMHNS* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1748 393 Coils Coil 61 81 - -
Tpr3g1748 393 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 4 376 - -
Tpr3g1748 393 SUPERFAMILY Protein kinase-like (PK-like) 100 369 IPR011009 -
Tpr3g1748 393 Gene3D Transferase(Phosphotransferase) domain 1 272 389 - -
Tpr3g1748 393 Gene3D Transferase(Phosphotransferase) domain 1 193 271 - -
Tpr3g1748 393 Pfam Protein tyrosine and serine/threonine kinase 119 369 IPR001245 GO:0004672|GO:0006468
Tpr3g1748 393 PANTHER RECEPTOR-LIKE PROTEIN 55 4 376 - -
Tpr3g1748 393 Gene3D Phosphorylase Kinase; domain 1 67 192 - -
Tpr3g1748 393 ProSiteProfiles Protein kinase domain profile. 116 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1748 Tpr-Chr3 15490085 15492605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1748 103 374 Receptor kinase-like Gene Family AT5G07280 33.775 2.71e-39 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g1748 PK_Tyr_Ser-Thr 2.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1748 - - gmx:102663800 474.167